RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 UBTFL6P0CB48 400 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 NUDCD3Q8IVD9 361 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 FAM81AQ8TBF8 368 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SH3GL2Q99962 352 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SUCLA2Q9P2R7 463 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SSX2IPQ9Y2D8 614 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 IQGAP2Q13576 1575 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 CCDC195A0A1B0GUA6 201 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 EXOC3O60645 756 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 BBS9Q3SYG4 887 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SGO2Q562F6 1265 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 RSRC2Q7L4I2 434 aaKnown RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 HELBQ8NG08 1087 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-203ENST00000358544 CCT7Q99832 543 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 MLXIPLQ9NP71 852 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 ZNF229Q9UJW7 825 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 TRPC6Q9Y210 931 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 KIAA0586Q9BVV6 1533 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 MAGEA13PA6NCF6 341 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 ADCY3O60266 1144 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 DSG1Q02413 1049 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 C10orf76Q5T2E6 689 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 HAUS3Q68CZ6 603 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 MAML3Q96JK9 1138 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 SNX24Q9Y343 169 aa6.56□□□□□ -1.36
VPS13B-203ENST00000358544 CCDC188H7C350 402 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 MCF2LO15068 1137 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 CFLARO15519 480 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 OLFML1Q6UWY5 402 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 KCNH5Q8NCM2 988 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ZNF483Q8TF39 744 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 SDCCAG3Q96C92 435 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 CAND2O75155 1236 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 DAB1O75553 588 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 PGM1P36871 562 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 TRPC1P48995 793 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 KPNB1Q14974 876 aaKnown RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 CASC4Q6P4E1 433 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 RSBN1LQ6PCB5 846 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 KIRREL3Q8IZU9 778 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 SERPINI1Q99574 410 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 MRPS9P82933 396 aaKnown RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ARHGAP4P98171 946 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 KIAA2013Q8IYS2 634 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 TAB3Q8N5C8 712 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ICA1LQ8NDH6 482 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 CATSPER1Q8NEC5 780 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ERP27Q96DN0 273 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 FAM208BQ5VWN6 2430 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 TEX33O43247 280 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 TOM1L1O75674 476 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 BCRP11274 1271 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 PMS2P54278 862 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 POLA2Q14181 598 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 EXOC3L4Q17RC7 722 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 GJC2Q5T442 439 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ZNF658Q5TYW1 1059 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 FMR1NBQ8N0W7 255 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 RSAD2Q8WXG1 361 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 APPBP2Q92624 585 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 XRCC5P13010 732 aaKnown RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 TRIP13Q15645 432 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 FAM133AQ8N9E0 248 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 KIFC3Q9BVG8 833 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 FOXP1Q9H334 677 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 TMOD1P28289 359 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 CACNA2D1P54289 1103 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 PTPN22Q9Y2R2 807 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 MAGI2Q86UL8 1455 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 MAP2K7O14733 419 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ABCD1P33897 745 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 SLC1A4P43007 532 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 MAN2A1Q16706 1144 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 MMEL1Q495T6 779 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 AKNAD1Q5T1N1 836 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ZKSCAN4Q969J2 545 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ANKIB1Q9P2G1 1089 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ORC6Q9Y5N6 252 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 MED13LQ71F56 2210 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 STAM2O75886 525 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ADCY7P51828 1080 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 LDHAL6AQ6ZMR3 332 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 TOM1L2Q6ZVM7 507 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 EPM2AIP1Q7L775 607 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 LZTS2Q9BRK4 669 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 USP44Q9H0E7 712 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 STX8Q9UNK0 236 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 STK24Q9Y6E0 443 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 HNRNPCL1O60812 293 aaKnown RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 PRPF6O94906 941 aaKnown RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 ARHGAP44Q17R89 818 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 DYMQ7RTS9 669 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 NAF1Q96HR8 494 aaKnown RBP6.55□□□□□ -1.36
VPS13B-203ENST00000358544 HAUS7Q99871 368 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 RSPH10B2B2RC85 870 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 O00370 1275 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 GSTA1P08263 222 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 RSPH10BP0C881 870 aa6.55□□□□□ -1.36
VPS13B-203ENST00000358544 VHLP40337 213 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms