RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 PDCD2LQ9BRP1 358 aa10□□□□□ -0.81
COL4A3BP-202ENST00000357457 C16orf70Q9BSU1 422 aa10□□□□□ -0.81
COL4A3BP-202ENST00000357457 ALG1Q9BT22 464 aa10□□□□□ -0.81
COL4A3BP-202ENST00000357457 KAT14Q9H8E8 782 aa10□□□□□ -0.81
COL4A3BP-202ENST00000357457 BMP2KQ9NSY1 1161 aaPredicted RBP10□□□□□ -0.81
COL4A3BP-202ENST00000357457 MRVI1Q9Y6F6 885 aa10□□□□□ -0.81
COL4A3BP-202ENST00000357457 EMSYQ7Z589 1322 aa10□□□□□ -0.81
COL4A3BP-202ENST00000357457 LAMA4Q16363 1823 aa10□□□□□ -0.81
COL4A3BP-202ENST00000357457 CFBP00751 764 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 PARP1P09874 1014 aaKnown RBP9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 ZNF286BP0CG31 522 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 COL19A1Q14993 1142 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 PLEKHG4Q58EX7 1191 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 SERINC5Q86VE9 423 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 GJD3Q8N144 294 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 DBF4BQ8NFT6 615 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 NEK9Q8TD19 979 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 TOP1MTQ969P6 601 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 MRPL38Q96DV4 380 aaKnown RBP9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 C17orf80Q9BSJ5 609 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 AMNQ9BXJ7 453 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 OSBPL3Q9H4L5 887 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 VAT1LQ9HCJ6 419 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 CTNNA3Q9UI47 895 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 MTUS1Q9ULD2 1270 aa9.99□□□□□ -0.81
COL4A3BP-202ENST00000357457 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 GRXCR2A6NFK2 248 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 PRR33A8MZF0 331 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 RSPH10B2B2RC85 870 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 TRIM6-TRIM34B2RNG4 842 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 B4E1Z4 1266 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 RSPH10BP0C881 870 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 PGM5Q15124 567 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 EPC2Q52LR7 807 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 STAG2Q8N3U4 1231 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 FBXO22Q8NEZ5 403 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 RILPL2Q969X0 211 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 SPATA33Q96N06 139 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 SAMD11Q96NU1 681 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 DSCC1Q9BVC3 393 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 NLRC5Q86WI3 1866 aa9.98□□□□□ -0.81
COL4A3BP-202ENST00000357457 POTEB3A0JP26 581 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 FAM86C2PA6NEL3 165 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 H3BNC9 293 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 H3BRB1 525 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 RBAK-RBAKDNI3L0D1 243 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 ZBTB5O15062 677 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 PPP1R11O60927 126 aaPredicted RBP9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 CAND2O75155 1236 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 GGPS1O95749 300 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 AMHP03971 560 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 UBA1P22314 1058 aaKnown RBP9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 KCNA5P22460 613 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 THPOP40225 353 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 SEC23AQ15436 765 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 PTPROQ16827 1216 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 PTCRAQ6ISU1 281 aaPredicted RBP9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 POTEBQ6S5H4 581 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 PLEKHM2Q8IWE5 1019 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 MYOCDQ8IZQ8 938 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 EFCAB3Q8N7B9 438 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 ATP6V0A1Q93050 837 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 KRT23Q9C075 422 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 LNPKQ9C0E8 428 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 TUT1Q9H6E5 874 aaKnown RBP9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 PCDHA1Q9Y5I3 950 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 TTC3P53804 2025 aa9.97□□□□□ -0.81
COL4A3BP-202ENST00000357457 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.81
COL4A3BP-202ENST00000357457 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 C17orf102A2RUQ5 167 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 KLRF2D3W0D1 207 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 TREHO43280 583 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 ALADP13716 330 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 IL9P15248 144 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 ICAM3P32942 547 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 RRP1P56182 461 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 ADAM17P78536 824 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 IMMTQ16891 758 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 SLC35G1Q2M3R5 365 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 IFIT1BQ5T764 474 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 CWC27Q6UX04 472 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 BANK1Q8NDB2 785 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 IL31RAQ8NI17 732 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 SEPT8Q92599 483 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 GPKOWQ92917 476 aaPredicted RBP eCLIP9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 PABPC5Q96DU9 382 aaKnown RBP9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 USP26Q9BXU7 913 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 OSBPL7Q9BZF2 842 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 BCAS3Q9H6U6 928 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 CNNM2Q9H8M5 875 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 COL4A6Q14031 1691 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 RALGAPA2Q2PPJ7 1873 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms