RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 BBS5Q8N3I7 341 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 BBS2Q9BXC9 721 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 DNAJC17Q9NVM6 304 aaKnown RBP8.64□□□□□ -1.03
SCN8A-201ENST00000354534 ANKRD36BQ8N2N9 1353 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 KRT72Q14CN4 511 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 SNRNP27Q8WVK2 155 aaKnown RBP8.64□□□□□ -1.03
SCN8A-201ENST00000354534 DEPDC7Q96QD5 511 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 PKD2L2Q9NZM6 624 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 STOML1Q9UBI4 398 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 ARAP1Q96P48 1450 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 ANKRD65E5RJM6 399 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 PUDPQ08623 228 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 SGO2Q562F6 1265 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 ACAD11Q709F0 780 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 RASSF3Q86WH2 238 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 SETDB2Q96T68 719 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 APOBEC2Q9Y235 224 aaKnown RBP8.64□□□□□ -1.03
SCN8A-201ENST00000354534 SUPT3HB4E1H0 165 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 TCP1P17987 556 aaKnown RBP8.64□□□□□ -1.03
SCN8A-201ENST00000354534 IYDQ6PHW0 289 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 TRIML1Q8N9V2 468 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 AZI2Q9H6S1 392 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 HMGB3O15347 200 aaKnown RBP8.64□□□□□ -1.03
SCN8A-201ENST00000354534 TRIM13O60858 407 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 BRD1O95696 1058 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 PLTPP55058 493 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 RUNX1T1Q06455 604 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 CREB3L3Q68CJ9 461 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 LRRC8EQ6NSJ5 796 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 MMS22LQ6ZRQ5 1243 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 LRRC49Q8IUZ0 686 aa8.64□□□□□ -1.03
SCN8A-201ENST00000354534 KLHL25Q9H0H3 589 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 RAD23BP54727 409 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 DYNLT1P63172 113 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 C19orf60Q96EN9 201 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 GTSE1Q9NYZ3 720 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 SCAF11Q99590 1463 aaKnown RBP8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CHMP1BQ7LBR1 199 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 TSPAN9O75954 239 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CENPAP49450 140 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 EHHADHQ08426 723 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 AP1B1Q10567 949 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 ANO1Q5XXA6 986 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 FAM178BQ8IXR5 827 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 OR8K1Q8NGG5 319 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 PITPNM3Q9BZ71 974 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 SPRTNQ9H040 489 aaPredicted RBP8.63□□□□□ -1.03
SCN8A-201ENST00000354534 HPS4Q9NQG7 708 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 RASSF7Q02833 373 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 BEND6Q5SZJ8 279 aaPredicted RBP8.63□□□□□ -1.03
SCN8A-201ENST00000354534 DARS2Q6PI48 645 aaKnown RBP8.63□□□□□ -1.03
SCN8A-201ENST00000354534 SELENONQ9NZV5 590 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 PAMP19021 973 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 TAC1P20366 129 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 STX3Q13277 289 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 PNOCQ13519 176 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 ANO4Q32M45 955 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CYGBQ8WWM9 190 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CASP10Q92851 521 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 TMEM60Q9H2L4 133 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CYP4F11Q9HBI6 524 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 ZFP69BQ9UJL9 534 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 PI4K2BG5E9Z4 385 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 RGS5O15539 181 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 TBC1D4O60343 1298 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CDC37L1Q7L3B6 337 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 TESK2Q96S53 571 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 OLFML3Q9NRN5 406 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 PPP2R2CQ9Y2T4 447 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 BIRC5O15392 142 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 SNX2O60749 519 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CXCR5P32302 372 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 PDE1AP54750 535 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 MYO1EQ12965 1108 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 FAM47CQ5HY64 1035 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 FAM102BQ5T8I3 360 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 TTC17Q96AE7 1141 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 SLC7A5P2Q9GIP4 190 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 POTEFA5A3E0 1075 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 KCNJ18B7U540 433 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 ATP5HO75947 161 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 KCNJ12Q14500 433 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 RHPN1Q8TCX5 695 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 CCDC51Q96ER9 411 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 XPO4Q9C0E2 1151 aaKnown RBP8.63□□□□□ -1.03
SCN8A-201ENST00000354534 LSG1Q9H089 658 aaKnown RBP8.63□□□□□ -1.03
SCN8A-201ENST00000354534 PICK1Q9NRD5 415 aa8.63□□□□□ -1.03
SCN8A-201ENST00000354534 DNALI1O14645 258 aaPredicted RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 NR1D1P20393 614 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 SLC7A5Q01650 507 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 DHX36Q9H2U1 1008 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 MBD2Q9UBB5 411 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 NOVA2Q9UNW9 492 aaKnown RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 TOP2BQ02880 1626 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 IL15P40933 162 aaPredicted RBP8.62□□□□□ -1.03
SCN8A-201ENST00000354534 NNTQ13423 1086 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
SCN8A-201ENST00000354534 NUDT16Q96DE0 195 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms