RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MS4A14Q96JA4 679 aa27.05■■□□□ 1.92
CPNE1-202ENST00000352393 FGFBP2Q9BYJ0 223 aa27.05■■□□□ 1.92
CPNE1-202ENST00000352393 SF3B2Q13435 895 aaKnown RBP27.05■■□□□ 1.92
CPNE1-202ENST00000352393 NAB2Q15742 525 aa27.05■■□□□ 1.92
CPNE1-202ENST00000352393 JMJD4Q9H9V9 463 aa27.05■■□□□ 1.92
CPNE1-202ENST00000352393 GDF3Q9NR23 364 aa27.05■■□□□ 1.92
CPNE1-202ENST00000352393 PCDHA2Q9Y5H9 948 aa27.05■■□□□ 1.92
CPNE1-202ENST00000352393 PNMA6FA0A0J9YX94 578 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 GABPAQ06546 454 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 TTMPQ5BVD1 217 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 SLF2Q8IX21 1173 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 CAPS2Q9BXY5 557 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 GPCPD1Q9NPB8 672 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 LUC7LQ9NQ29 371 aaKnown RBP27.04■■□□□ 1.92
CPNE1-202ENST00000352393 KDM3AQ9Y4C1 1321 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 PALMO75781 387 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 GNA14O95837 355 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 MFSD14BQ5SR56 506 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 CNBD1Q8NA66 436 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 PCDHGC5Q9Y5F6 944 aa27.04■■□□□ 1.92
CPNE1-202ENST00000352393 HSF2BPO75031 334 aa27.03■■□□□ 1.92
CPNE1-202ENST00000352393 CLSTN1O94985 981 aa27.03■■□□□ 1.92
CPNE1-202ENST00000352393 AKR1B1P15121 316 aa27.03■■□□□ 1.92
CPNE1-202ENST00000352393 ATP2B4P23634 1241 aa27.03■■□□□ 1.92
CPNE1-202ENST00000352393 POLR2FP61218 127 aaKnown RBP27.03■■□□□ 1.92
CPNE1-202ENST00000352393 ZNF543Q08ER8 600 aa27.03■■□□□ 1.92
CPNE1-202ENST00000352393 SLC18A3Q16572 532 aa27.03■■□□□ 1.92
CPNE1-202ENST00000352393 ZC3H3Q8IXZ2 948 aaKnown RBP27.03■■□□□ 1.92
CPNE1-202ENST00000352393 CCNL1Q9UK58 526 aaPredicted RBP27.03■■□□□ 1.92
CPNE1-202ENST00000352393 LY75O60449 1722 aa27.03■■□□□ 1.92
CPNE1-202ENST00000352393 GRID2IPA4D2P6 1211 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 EIF3HO15372 352 aaKnown RBP eCLIP27.02■■□□□ 1.928e-7■■□□□ 13.6
CPNE1-202ENST00000352393 GCFC2P16383 781 aaKnown RBP27.02■■□□□ 1.92
CPNE1-202ENST00000352393 NAP1L1P55209 391 aaKnown RBP27.02■■□□□ 1.92
CPNE1-202ENST00000352393 IFT20Q8IY31 132 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 NT5C3AQ9H0P0 336 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 GREB1LQ9C091 1923 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-202ENST00000352393 GLI1P08151 1106 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 SKOR1P84550 965 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 CLEC10AQ8IUN9 316 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 ADGRF4Q8IZF3 695 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 CUL5Q93034 780 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 ARL8AQ96BM9 186 aa27.02■■□□□ 1.92
CPNE1-202ENST00000352393 KLRC1P26715 233 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 GJA10Q969M2 543 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 INPP4AQ96PE3 977 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-202ENST00000352393 RUFY1Q96T51 708 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.01■■□□□ 1.91
CPNE1-202ENST00000352393 MEI1Q5TIA1 1274 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 DPP8Q6V1X1 898 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-202ENST00000352393 CCDC65Q8IXS2 484 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 TBC1D5Q92609 795 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 ZIM3Q96PE6 472 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 GANQ9H2C0 597 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 KCTD10Q9H3F6 313 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 BMP2KQ9NSY1 1161 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-202ENST00000352393 AIPL1Q9NZN9 384 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 GGA1Q9UJY5 639 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 DAGLAQ9Y4D2 1042 aa27.01■■□□□ 1.91
CPNE1-202ENST00000352393 FTCDO95954 541 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 EIF6P56537 245 aaKnown RBP27■■□□□ 1.91
CPNE1-202ENST00000352393 APBA1Q02410 837 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 PAK2Q13177 524 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 EFCAB13Q8IY85 973 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 TBC1D22AQ8WUA7 517 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 EHD4Q9H223 541 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 TBC1D7Q9P0N9 293 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 MYH4Q9Y623 1939 aa27■■□□□ 1.91
CPNE1-202ENST00000352393 ANKRD65E5RJM6 399 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 HEXIM1O94992 359 aaKnown RBP26.99■■□□□ 1.91
CPNE1-202ENST00000352393 CARSP49589 748 aaKnown RBP26.99■■□□□ 1.91
CPNE1-202ENST00000352393 GNGT1P63211 74 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 RAPGEF1Q13905 1077 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 MREGQ8N565 214 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 SCFD1Q8WVM8 642 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 PPM1EQ8WY54 764 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 PCDHA12Q9UN75 941 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 A0A087X0T9 212 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 E9PMD0 336 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 SSBP05455 408 aaKnown RBP eCLIP26.99■■□□□ 1.91
CPNE1-202ENST00000352393 FAM228BP0C875 321 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 NELFCDQ8IXH7 590 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 RPGRQ92834 1020 aaKnown RBP26.99■■□□□ 1.91
CPNE1-202ENST00000352393 LTBP1Q14766 1721 aa26.99■■□□□ 1.91
CPNE1-202ENST00000352393 VGLL3A8MV65 326 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 TOM1O60784 492 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 TTLL1O95922 423 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 PLA2G4BP0C869 781 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 RFC4P35249 363 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 CCT5P48643 541 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 FAM107BQ9H098 131 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 NFU1Q9UMS0 254 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 ATF5Q9Y2D1 282 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-202ENST00000352393 QSER1Q2KHR3 1735 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 ZSCAN5CA6NGD5 496 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-202ENST00000352393 SLC26A4O43511 780 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 MRPL12P52815 198 aaKnown RBP26.98■■□□□ 1.91
CPNE1-202ENST00000352393 PRR5LQ6MZQ0 368 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 IQCKQ8N0W5 287 aa26.98■■□□□ 1.91
CPNE1-202ENST00000352393 FRMD3A2A2Y4 597 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms