RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 BRINP1O60477 761 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 CAMK2GQ13555 558 aaPredicted RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 KRT27Q7Z3Y8 459 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 FCHSD1Q86WN1 690 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 SULF2Q8IWU5 870 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 ARL8AQ96BM9 186 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 ARMC5Q96C12 935 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 UPF3BQ9BZI7 483 aaKnown RBP6.56□□□□□ -1.36
RFC1-201ENST00000349703 UBN1Q9NPG3 1134 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 UHRF1BP1LA0JNW5 1464 aa6.56□□□□□ -1.36
RFC1-201ENST00000349703 ERVH48-1M5A8F1 160 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 RAB27AP51159 221 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 ZNF75DP51815 510 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 HOOK3Q86VS8 718 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 GABPB2Q8TAK5 448 aaPredicted RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 RUNDC3BQ96NL0 473 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 MTA3Q9BTC8 594 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 SAP130Q9H0E3 1048 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 RUBCNLQ9H714 662 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 SAMSN1Q9NSI8 373 aaKnown RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 CTNNA3Q9UI47 895 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 KCNH3Q9ULD8 1083 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 PLB1Q6P1J6 1458 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 ERCC6Q03468 1493 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 KLHL33A6NCF5 533 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 GALR2O43603 387 aaPredicted RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 TSPAN9O75954 239 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 FTLP02792 175 aaPredicted RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 MCM3P25205 808 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 HALP42357 657 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 LIG3P49916 1009 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 HDAC4P56524 1084 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 PCSK7Q16549 785 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 C2CD5Q86YS7 1000 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 UNC45BQ8IWX7 931 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 SAT2Q96F10 170 aaPredicted RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 DCLRE1CQ96SD1 692 aaKnown RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 UTP14AQ9BVJ6 771 aaKnown RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 UNC45AQ9H3U1 944 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 LEMD3Q9Y2U8 911 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 RGS12O14924 1447 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 PGM1P36871 562 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 CCNFP41002 786 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 RPP30P78346 268 aaKnown RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 IRX5P78411 483 aaPredicted RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 NCBP1Q09161 790 aaKnown RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 EFR3AQ14156 821 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 COG2Q14746 738 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 NFIL3Q16649 462 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 PCNX4Q63HM2 1172 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 ADAMTS19Q8TE59 1207 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 HSPBAP1Q96EW2 488 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 NACA2Q9H009 215 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 VPS45Q9NRW7 570 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 OLA1Q9NTK5 396 aaKnown RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 ABCC10Q5T3U5 1492 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 ZNF518AQ6AHZ1 1483 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 OSMP13725 252 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 GALK1P51570 392 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 BLVRAP53004 296 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 CUL4AQ13619 759 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 KRT32Q14532 448 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 THOC7Q6I9Y2 204 aaKnown RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 TAS1R3Q7RTX0 852 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 DNAJB7Q7Z6W7 309 aaPredicted RBP6.55□□□□□ -1.36
RFC1-201ENST00000349703 SAMD15Q9P1V8 674 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 FAM135BQ49AJ0 1406 aa6.55□□□□□ -1.36
RFC1-201ENST00000349703 MEFVO15553 781 aaPredicted RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 GJB2P29033 226 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 CASQ1P31415 396 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 TAF5Q15542 800 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 RTN1Q16799 776 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 GET4Q7L5D6 327 aaPredicted RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 PALM2Q8IXS6 379 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 SETD6Q8TBK2 473 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 DYDC1Q8WWB3 177 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 FEZ2Q9UHY8 353 aaPredicted RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 GPC4O75487 556 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 GAS8O95995 478 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 CYP11A1P05108 521 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 EEF2P13639 858 aaKnown RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 SLC7A1P30825 629 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 AK2P54819 239 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 DAB2P98082 770 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 POU4F1Q01851 419 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 ZSCAN25Q6NSZ9 544 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 OR6P1Q8NGX9 317 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 ZMAT2Q96NC0 199 aaKnown RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 ANO3Q9BYT9 981 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 CCDC8Q9H0W5 538 aaPredicted RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 EXOC1Q9NV70 894 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 GIT1Q9Y2X7 761 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 NPHP3Q7Z494 1330 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 ATP10AO60312 1499 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 BTBD11A6QL63 1104 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 SNX2O60749 519 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 STAU1O95793 577 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms