RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 SNAP23O00161 211 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 IDEP14735 1019 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 OTUD7BQ6GQQ9 843 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 C8orf74Q6P047 294 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 SLC15A3Q8IY34 581 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 CCR3P51677 355 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 MIGA2Q7L4E1 593 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 ATP6V1G3Q96LB4 118 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 NUDCD1Q96RS6 583 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 COL15A1P39059 1388 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 PCYT1AP49585 367 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 TNIP1Q15025 636 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 QPCTQ16769 361 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 PALMDQ9NP74 551 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 ATAD3AQ9NVI7 634 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
CTNNB1-201ENST00000349496 GOLGA8AA7E2F4 631 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 HMGB1P1B2RPK0 211 aaPredicted RBP13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 POTEJP0CG39 1038 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 RIPK1Q13546 671 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 CYLC2Q14093 348 aaPredicted RBP13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 MSH2P43246 934 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 TMEM214Q6NUQ4 689 aaKnown RBP13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 CCDC174Q6PII3 467 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 SLC2A7Q6PXP3 512 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 HDAC7Q8WUI4 952 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 MAK16Q9BXY0 300 aaKnown RBP13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 CNGB3Q9NQW8 809 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 BLOC1S2Q6QNY1 142 aa13.29□□□□□ -0.28
CTNNB1-201ENST00000349496 ABLIM1O14639 778 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 ENDOUP21128 410 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 BDNFP23560 247 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 PTPN12Q05209 780 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 KAZNQ674X7 775 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 FAM117BQ6P1L5 589 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 SPATA24Q86W54 205 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 DCLK2Q8N568 766 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 LZTS1Q9Y250 596 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 RBMX2Q9Y388 322 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 MGEA5O60502 916 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 GSTT2P0CG29 244 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 GSTT2BP0CG30 244 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 S100A1P23297 94 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 CCT6AP40227 531 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 CYTH1Q15438 398 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 DDX50Q9BQ39 737 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 BPIFA3Q9BQP9 254 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 DSEQ9UL01 958 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 TLDC2A0PJX2 215 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 GHRP10912 638 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 ATP6V1C1P21283 382 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 IFNAR2P48551 515 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 RALGDSQ12967 914 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 GLE1Q53GS7 698 aaKnown RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 LRRC8BQ6P9F7 803 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 EMBQ6PCB8 327 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 RUFY2Q8WXA3 655 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 GPATCH3Q96I76 525 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 RAB3IPQ96QF0 476 aaPredicted RBP13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 GOLPH3LQ9H4A5 285 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 NRDE2Q9H7Z3 1164 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
CTNNB1-201ENST00000349496 MSL3P1P0C860 447 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 PSMA5P28066 241 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 ITGB3BPQ13352 177 aaPredicted RBP13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 PKN1Q16512 942 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 C6orf89Q6UWU4 347 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 PHLDB2Q86SQ0 1253 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 UBLCP1Q8WVY7 318 aaPredicted RBP13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 FAM89AQ96GI7 184 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 TAF1DQ9H5J8 278 aaPredicted RBP13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
CTNNB1-201ENST00000349496 CPLX1O14810 134 aa13.27□□□□□ -0.29
CTNNB1-201ENST00000349496 NVLO15381 856 aaKnown RBP13.27□□□□□ -0.29
CTNNB1-201ENST00000349496 TRPM8Q7Z2W7 1104 aa13.27□□□□□ -0.29
CTNNB1-201ENST00000349496 CCDC127Q96BQ5 260 aa13.27□□□□□ -0.29
CTNNB1-201ENST00000349496 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
CTNNB1-201ENST00000349496 DDX18Q9NVP1 670 aaKnown RBP13.27□□□□□ -0.29
CTNNB1-201ENST00000349496 NOVA2Q9UNW9 492 aaKnown RBP13.27□□□□□ -0.29
CTNNB1-201ENST00000349496 HEY1Q9Y5J3 304 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms