RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 USP17L6PQ6QN14 398 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 TLR10Q9BXR5 811 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 KCTD10Q9H3F6 313 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 NLRC4Q9NPP4 1024 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 POTEB3A0JP26 581 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 POTECB2RU33 542 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 RBAK-RBAKDNI3L0D1 243 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 MAGEA1P43355 309 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 POTEBQ6S5H4 581 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 TSG101Q99816 390 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 DEF6Q9H4E7 631 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 MYO3BQ8WXR4 1341 aa16.08■□□□□ 0.16
ARHGEF1-202ENST00000347545 PPEF1O14829 653 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 MCM3P25205 808 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 STAT3P40763 770 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 RASSF7Q02833 373 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 ARSHQ5FYA8 562 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 KLHDC7AQ5VTJ3 777 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 SPATA4Q8NEY3 305 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 KCNMB3Q9NPA1 279 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 SWAP70Q9UH65 585 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 KIAA1024Q9UPX6 916 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 TRIM59Q8IWR1 403 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 NELFCDQ8IXH7 590 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 SCFD1Q8WVM8 642 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 EDEM3Q9BZQ6 932 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 LCMT1Q9UIC8 334 aa16.07■□□□□ 0.16
ARHGEF1-202ENST00000347545 TRAF5O00463 557 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 MED24O75448 989 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 GGCXP38435 758 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 ITIH3Q06033 890 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 HSP90B2PQ58FF3 399 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 APOBEC3HQ6NTF7 200 aaKnown RBP16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 ZC3H3Q8IXZ2 948 aaKnown RBP16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 LRRC27Q9C0I9 530 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 CEP72Q9P209 647 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 SSU72P8A0A1W2PR75 194 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 TOM1O60784 492 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 SSBP05455 408 aaKnown RBP eCLIP16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 PLA2G4BP0C869 781 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 CYP11B2P19099 503 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 SEPT2Q15019 361 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 QRICH1Q2TAL8 776 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 FAM83BQ5T0W9 1011 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 LSM14BQ9BX40 385 aaKnown RBP16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 HYOU1Q9Y4L1 999 aa16.06■□□□□ 0.16
ARHGEF1-202ENST00000347545 BUB1O43683 1085 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 RPS6KA5O75582 802 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 GCFC2P16383 781 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 MRPL12P52815 198 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 SLC7A5Q01650 507 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 HAUS3Q68CZ6 603 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 DPY19L2P1Q6NXN4 242 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 FRMD3A2A2Y4 597 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 FAM196BA6NMK8 535 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 MPHOSPH10O00566 681 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 CASP5P51878 434 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 MARSP56192 900 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 SPIRE1Q08AE8 756 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 GPBP1Q86WP2 473 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 CRYGNQ8WXF5 182 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 MBOAT7Q96N66 472 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 ACBD3Q9H3P7 528 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 SUGT1Q9Y2Z0 365 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 SLC12A3P55017 1021 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 CCDC40Q4G0X9 1142 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 LRRC31Q6UY01 552 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 MS4A14Q96JA4 679 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 CEP63Q96MT8 703 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 FEZ2Q9UHY8 353 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
ARHGEF1-202ENST00000347545 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 POLR2FP61218 127 aaKnown RBP16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 GANQ9H2C0 597 aa16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 RBBP6Q7Z6E9 1792 aaKnown RBP16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 POTEFA5A3E0 1075 aa16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 MATR3P43243 847 aaKnown RBP eCLIP16.04■□□□□ 0.163e-24■■□□□ 13.2
ARHGEF1-202ENST00000347545 IQCEQ6IPM2 695 aa16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 POTEEQ6S8J3 1075 aa16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 SYN2Q92777 582 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 RBM12Q9NTZ6 932 aaKnown RBP16.04■□□□□ 0.16
ARHGEF1-202ENST00000347545 FAM184BQ9ULE4 1060 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms