RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 EBAG9O00559 213 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 PCP11498 1178 aaKnown RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 KLRC1P26715 233 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 ECM1Q16610 540 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 CFAP221Q4G0U5 840 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 CCSER1Q9C0I3 900 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 MYO1AQ9UBC5 1043 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 DNM3Q9UQ16 869 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 LAMA4Q16363 1823 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 TTLL1O95922 423 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 KCNA1Q09470 495 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 ZNF211Q13398 564 aaPredicted RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 QRICH1Q2TAL8 776 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 CERKLQ49MI3 558 aaPredicted RBP13.8□□□□□ -0.2
LMX1A-202ENST00000342310 SFR1Q86XK3 245 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 GOLGA5Q8TBA6 731 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 MTMR4Q9NYA4 1195 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 JRKLQ9Y4A0 524 aa13.8□□□□□ -0.2
LMX1A-202ENST00000342310 SCN11AQ9UI33 1791 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 VPS41P49754 854 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 ZMYND12Q9H0C1 365 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
LMX1A-202ENST00000342310 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 LEMD3Q9Y2U8 911 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 A0A087X0T9 212 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 FAM228BP0C875 321 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 RCAN1P53805 252 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 ICA1Q05084 483 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 RPS6KA1Q15418 735 aa13.79□□□□□ -0.2
LMX1A-202ENST00000342310 MRRFQ96E11 262 aaKnown RBP13.79□□□□□ -0.2
LMX1A-202ENST00000342310 DNAJC17Q9NVM6 304 aaKnown RBP13.79□□□□□ -0.2
LMX1A-202ENST00000342310 PDS5AQ29RF7 1337 aaKnown RBP13.79□□□□□ -0.2
LMX1A-202ENST00000342310 TRIM49P0CI25 452 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 TRIM49CP0CI26 452 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 XRCC5P13010 732 aaKnown RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 EEF2P13639 858 aaKnown RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 MCM3P25205 808 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 IRX3P78415 501 aaPredicted RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 KCNH2Q12809 1159 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 ZNF746Q6NUN9 644 aaPredicted RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 TRAPPC11Q7Z392 1133 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 PEX26Q7Z412 305 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 RAD54LQ92698 747 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 ARL8AQ96BM9 186 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 MMTAG2Q9BU76 263 aaKnown RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 TAF1P21675 1872 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 MYH10P35580 1976 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 GUCY1A3Q02108 690 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 CDC37Q16543 378 aaPredicted RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 ZC2HC1CQ53FD0 456 aaPredicted RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 TBC1D16Q8TBP0 767 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 BLOC1S4Q9NUP1 217 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 EIF3CLB5ME19 914 aaKnown RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 IVLP07476 585 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 CCDC127Q96BQ5 260 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 EIF3CQ99613 913 aaKnown RBP13.78□□□□□ -0.2
LMX1A-202ENST00000342310 CAPS2Q9BXY5 557 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 SNX12Q9UMY4 172 aa13.78□□□□□ -0.2
LMX1A-202ENST00000342310 CASP4P49662 377 aa13.77□□□□□ -0.2
LMX1A-202ENST00000342310 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.2
LMX1A-202ENST00000342310 RETREG2Q8NC44 543 aa13.77□□□□□ -0.2
LMX1A-202ENST00000342310 TEKT1Q969V4 418 aa13.77□□□□□ -0.2
LMX1A-202ENST00000342310 AK8Q96MA6 479 aa13.77□□□□□ -0.2
LMX1A-202ENST00000342310 KCND1Q9NSA2 647 aa13.77□□□□□ -0.2
LMX1A-202ENST00000342310 HPCAL4Q9UM19 191 aa13.77□□□□□ -0.2
LMX1A-202ENST00000342310 E7EVH7 732 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 GH2P01242 217 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 NMT1P30419 496 aaKnown RBP13.77□□□□□ -0.21
LMX1A-202ENST00000342310 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 MTA3Q9BTC8 594 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 TSGA10Q9BZW7 698 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 HDAC9Q9UKV0 1011 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 KRIT1O00522 736 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 MYBP10242 640 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 SLCO1A2P46721 670 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 SEC24CP53992 1094 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 VPS36Q86VN1 386 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 SELENOSQ9BQE4 189 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 ITIH6Q6UXX5 1313 aa13.77□□□□□ -0.21
LMX1A-202ENST00000342310 MYH8P13535 1937 aa13.76□□□□□ -0.21
LMX1A-202ENST00000342310 FAM153BP0C7A2 387 aa13.76□□□□□ -0.21
LMX1A-202ENST00000342310 CASP5P51878 434 aa13.76□□□□□ -0.21
LMX1A-202ENST00000342310 SETQ01105 290 aaPredicted RBP13.76□□□□□ -0.21
LMX1A-202ENST00000342310 NNTQ13423 1086 aa13.76□□□□□ -0.21
LMX1A-202ENST00000342310 KCNB1Q14721 858 aa13.76□□□□□ -0.21
LMX1A-202ENST00000342310 FAM153CQ494X1 144 aa13.76□□□□□ -0.21
LMX1A-202ENST00000342310 MIIPQ5JXC2 388 aa13.76□□□□□ -0.21
LMX1A-202ENST00000342310 CCNI2Q6ZMN8 369 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms