RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 CTDP1Q9Y5B0 961 aaPredicted RBP17.02■□□□□ 0.31
TUBB4B-201ENST00000340384 MYH7BA7E2Y1 1941 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 ATP1A3P13637 1013 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 PLCG1P19174 1290 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 SFPQP23246 707 aaKnown RBP eCLIP17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 GHRHRQ02643 423 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 SPAG1Q07617 926 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 ANKRD20A12PQ8NF67 263 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 BLZF1Q9H2G9 400 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 COL20A1Q9P218 1284 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 RWDD2AQ9UIY3 292 aa17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
TUBB4B-201ENST00000340384 PP2D1A8MPX8 630 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 TDP2O95551 362 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 CDC25AP30304 524 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 FILIP1LQ4L180 1135 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 NAALADL2Q58DX5 795 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 KRT79Q5XKE5 535 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 NCAPG2Q86XI2 1143 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 CCDC112Q8NEF3 446 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 STAMQ92783 540 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 PURBQ96QR8 312 aaKnown RBP17■□□□□ 0.31
TUBB4B-201ENST00000340384 ANO3Q9BYT9 981 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 KDM3AQ9Y4C1 1321 aa17■□□□□ 0.31
TUBB4B-201ENST00000340384 SPDYE3A6NKU9 549 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 HSD17B4P51659 736 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 PAK1Q13153 545 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 TKFCQ3LXA3 575 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 KLHL10Q6JEL2 608 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 VSTM4Q8IW00 320 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 TRMT44Q8IYL2 757 aaKnown RBP16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 SLFN12Q8IYM2 578 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 SHCBP1Q8NEM2 672 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 CHST13Q8NET6 341 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 MTRQ99707 1265 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 C7orf25Q9BPX7 421 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 A1CFQ9NQ94 594 aaKnown RBP16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 STK24Q9Y6E0 443 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 CYP3A7-CYP3A51PA0A087WV96 503 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 SLC37A4O43826 429 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 EDIL3O43854 480 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 SLC25A27O95847 323 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 SKILP12757 684 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 CYP3A7P24462 503 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 CASP1P29466 404 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 LRMPQ12912 555 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 SLC30A10Q6XR72 485 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 SV2BQ7L1I2 683 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 WBP1LQ9NX94 342 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 PNMA2Q9UL42 364 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 CTNND2Q9UQB3 1225 aa16.99■□□□□ 0.31
TUBB4B-201ENST00000340384 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 RHOBTB3O94955 611 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 CFBP00751 764 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 CD44P16070 742 aaKnown RBP16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 RPS6P62753 249 aaKnown RBP16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 BAATQ14032 418 aaPredicted RBP16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 ARHGAP39Q9C0H5 1083 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 MROH8Q9H579 483 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 EHMT1Q9H9B1 1298 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 EXOC1Q9NV70 894 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 CYP39A1Q9NYL5 469 aa16.98■□□□□ 0.31
TUBB4B-201ENST00000340384 ASTN1O14525 1302 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 PSMA7O14818 248 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 TBX3O15119 743 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 KCNJ6P48051 423 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 CDKAL1Q5VV42 579 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 SYTL5Q8TDW5 730 aaPredicted RBP16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 SNX29Q8TEQ0 813 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 MBOAT7Q96N66 472 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 NT5C3AQ9H0P0 336 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 PCDHA12Q9UN75 941 aa16.97■□□□□ 0.31
TUBB4B-201ENST00000340384 CCNA1P78396 465 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 KMT5BQ4FZB7 885 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 CNNM4Q6P4Q7 775 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 NSMFQ6X4W1 530 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 GPR142Q7Z601 462 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 NOC3LQ8WTT2 800 aaKnown RBP16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 NELFBQ8WX92 580 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 FGD4Q96M96 766 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 MMTAG2Q9BU76 263 aaKnown RBP16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 SAMSN1Q9NSI8 373 aaKnown RBP16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 SAGE1Q9NXZ1 904 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 TSKSQ9UJT2 592 aa16.96■□□□□ 0.31
TUBB4B-201ENST00000340384 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 CCP110O43303 1012 aa16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 TPM2P07951 284 aa16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 POLR2MP0CAP2 368 aa16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 ASIC1P78348 528 aa16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 CCZ1BP86790 482 aa16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 CCZ1P86791 482 aaPredicted RBP16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 CNTN2Q02246 1040 aa16.96■□□□□ 0.3
TUBB4B-201ENST00000340384 MAP2K1Q02750 393 aaPredicted RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms