RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 GGPS1O95749 300 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 POLR2MP0CAP2 368 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 UBA1P22314 1058 aaKnown RBP13.33□□□□□ -0.28
TREM2-201ENST00000338469 KIF5BP33176 963 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 MBTPS1Q14703 1052 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 ME3Q16798 604 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
TREM2-201ENST00000338469 BRDTQ58F21 947 aaPredicted RBP13.33□□□□□ -0.28
TREM2-201ENST00000338469 USP17L6PQ6QN14 398 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 RPUSD2Q8IZ73 545 aaKnown RBP13.33□□□□□ -0.28
TREM2-201ENST00000338469 SNX21Q969T3 373 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 C16orf70Q9BSU1 422 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 SLKQ9H2G2 1235 aaPredicted RBP13.33□□□□□ -0.28
TREM2-201ENST00000338469 SH2B1Q9NRF2 756 aaPredicted RBP13.33□□□□□ -0.28
TREM2-201ENST00000338469 RTEL1Q9NZ71 1219 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 GTF2IRD1Q9UHL9 959 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 SLC4A7Q9Y6M7 1214 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 DOCK5Q9H7D0 1870 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 FRMPD4Q14CM0 1322 aa13.33□□□□□ -0.28
TREM2-201ENST00000338469 TANC1Q9C0D5 1861 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 ZBBXA8MT70 800 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 PITPNM1O00562 1244 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 MEIS2O14770 477 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 PFKFB2O60825 505 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 NBNO60934 754 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 LARGE1O95461 756 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 F2P00734 622 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 ANP32AP39687 249 aaKnown RBP13.32□□□□□ -0.28
TREM2-201ENST00000338469 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
TREM2-201ENST00000338469 LAMC2Q13753 1193 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 MFSD10Q14728 455 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 DGKDQ16760 1214 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 RTN1Q16799 776 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 KIAA0753Q2KHM9 967 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 DHX37Q8IY37 1157 aaKnown RBP13.32□□□□□ -0.28
TREM2-201ENST00000338469 FANCBQ8NB91 859 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 PPTC7Q8NI37 304 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 PPM1EQ8WY54 764 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
TREM2-201ENST00000338469 MAP3K20Q9NYL2 800 aaKnown RBP13.32□□□□□ -0.28
TREM2-201ENST00000338469 TRANK1O15050 2925 aa13.32□□□□□ -0.28
TREM2-201ENST00000338469 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
TREM2-201ENST00000338469 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
TREM2-201ENST00000338469 CKBP12277 381 aa13.31□□□□□ -0.28
TREM2-201ENST00000338469 ATP2A2P16615 1042 aaKnown RBP13.31□□□□□ -0.28
TREM2-201ENST00000338469 RAB30Q15771 203 aa13.31□□□□□ -0.28
TREM2-201ENST00000338469 SPATA33Q96N06 139 aa13.31□□□□□ -0.28
TREM2-201ENST00000338469 SPZ1Q9BXG8 430 aa13.31□□□□□ -0.28
TREM2-201ENST00000338469 CERS4Q9HA82 394 aa13.31□□□□□ -0.28
TREM2-201ENST00000338469 MSRAQ9UJ68 235 aa13.31□□□□□ -0.28
TREM2-201ENST00000338469 SPATA31C2B4DYI2 1134 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 PPFIA4O75335 1185 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 CA3P07451 260 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 CCND2P30279 289 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 GNAQP50148 359 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 RBL2Q08999 1139 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 SCRN1Q12765 414 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 BECN1Q14457 450 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 CCDC85BQ15834 202 aaPredicted RBP13.3□□□□□ -0.28
TREM2-201ENST00000338469 KRT40Q6A162 431 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 CCDC82Q8N4S0 544 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 SAMD3Q8N6K7 520 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 NECAB1Q8N987 351 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 GTF3C6Q969F1 213 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 TMX3Q96JJ7 454 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 INPP4AQ96PE3 977 aaPredicted RBP13.3□□□□□ -0.28
TREM2-201ENST00000338469 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
TREM2-201ENST00000338469 RAPGEFL1Q9UHV5 662 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 RBM19Q9Y4C8 960 aaKnown RBP13.3□□□□□ -0.28
TREM2-201ENST00000338469 PCDHA11Q9Y5I1 949 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 MUC3AQ02505 3323 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 XIRP2A4UGR9 3374 aa13.3□□□□□ -0.28
TREM2-201ENST00000338469 LCHNA4D1U4 455 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 CPLX1O14810 134 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 ATP9AO75110 1047 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 CXCL10P02778 98 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 PFKMP08237 780 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 SELPP16109 830 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 CDC27P30260 824 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 ICAM3P32942 547 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 RFC2P35250 354 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
TREM2-201ENST00000338469 DEFB103AP81534 67 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 BFSP2Q13515 415 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 ZNF618Q5T7W0 954 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 TYW1BQ6NUM6 668 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 CPLX2Q6PUV4 134 aaKnown RBP13.29□□□□□ -0.28
TREM2-201ENST00000338469 TMTC3Q6ZXV5 915 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 CYFIP1Q7L576 1253 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 CCDC83Q8IWF9 413 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 C7orf31Q8N865 590 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 LZTS2Q9BRK4 669 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 FTOQ9C0B1 505 aaKnown RBP eCLIP13.29□□□□□ -0.28
TREM2-201ENST00000338469 MTIF3Q9H2K0 278 aaKnown RBP13.29□□□□□ -0.28
TREM2-201ENST00000338469 SLC28A3Q9HAS3 691 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 NOD1Q9Y239 953 aa13.29□□□□□ -0.28
TREM2-201ENST00000338469 PRRC2BQ5JSZ5 2229 aaKnown RBP13.28□□□□□ -0.28
TREM2-201ENST00000338469 LGALS2P05162 132 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms