RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 OTOP1Q7RTM1 612 aa24.26■■□□□ 1.47
TPM1-204ENST00000334895 FSIP1Q8NA03 581 aa24.26■■□□□ 1.47
TPM1-204ENST00000334895 MRPS27Q92552 414 aaKnown RBP24.26■■□□□ 1.47
TPM1-204ENST00000334895 SYMPKQ92797 1274 aaKnown RBP24.26■■□□□ 1.47
TPM1-204ENST00000334895 CDHR1Q96JP9 859 aa24.26■■□□□ 1.47
TPM1-204ENST00000334895 PDGFCQ9NRA1 345 aa24.26■■□□□ 1.47
TPM1-204ENST00000334895 A0A1B0GVL5 298 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 GAS7O60861 476 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 ARIH2O95376 493 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 LIG1P18858 919 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 PDIA5Q14554 519 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 TAPT1Q6NXT6 567 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 VTA1Q9NP79 307 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 SRRDQ9UH36 339 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 HPSEQ9Y251 543 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 TRIM17Q9Y577 477 aa24.25■■□□□ 1.47
TPM1-204ENST00000334895 FAM237AA0A1B0GTK4 181 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 AK8Q96MA6 479 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 MMTAG2Q9BU76 263 aaKnown RBP24.24■■□□□ 1.47
TPM1-204ENST00000334895 DDX39AO00148 427 aaKnown RBP24.24■■□□□ 1.47
TPM1-204ENST00000334895 PFKFB1P16118 471 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 UBA1P22314 1058 aaKnown RBP24.24■■□□□ 1.47
TPM1-204ENST00000334895 CYP2C19P33261 490 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 PPP2R5CQ13362 524 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 TMEM63BQ5T3F8 832 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 CCDC62Q6P9F0 684 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 CTU1Q7Z7A3 348 aaKnown RBP24.24■■□□□ 1.47
TPM1-204ENST00000334895 TEKT3Q9BXF9 490 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 UNC45AQ9H3U1 944 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 TBC1D22BQ9NU19 505 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 LRWD1Q9UFC0 647 aa24.24■■□□□ 1.47
TPM1-204ENST00000334895 DDX41Q9UJV9 622 aaKnown RBP24.24■■□□□ 1.47
TPM1-204ENST00000334895 RBM47A0AV96 593 aaKnown RBP24.23■■□□□ 1.47
TPM1-204ENST00000334895 EML1O00423 815 aa24.23■■□□□ 1.47
TPM1-204ENST00000334895 PTMSP20962 102 aa24.23■■□□□ 1.47
TPM1-204ENST00000334895 NDUFA8P51970 172 aa24.23■■□□□ 1.47
TPM1-204ENST00000334895 TRIB2Q92519 343 aa24.23■■□□□ 1.47
TPM1-204ENST00000334895 ABHD16BQ9H3Z7 469 aa24.23■■□□□ 1.47
TPM1-204ENST00000334895 NFASCO94856 1347 aa24.23■■□□□ 1.47
TPM1-204ENST00000334895 HTTP42858 3142 aa24.23■■□□□ 1.47
TPM1-204ENST00000334895 TGFB3P10600 412 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 ACVR2BQ13705 512 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 LY6KQ17RY6 165 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 ENGASEQ8NFI3 743 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 SENP7Q9BQF6 1050 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 RAB34Q9BZG1 259 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 TELO2Q9Y4R8 837 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 CENPFP49454 3210 aa24.22■■□□□ 1.47
TPM1-204ENST00000334895 A0A087X0B3 334 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 CHMP2AO43633 222 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 CCNE2O96020 404 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 GNRH1P01148 92 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 IRF5Q13568 498 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 SNW1Q13573 536 aaKnown RBP24.21■■□□□ 1.47
TPM1-204ENST00000334895 PRAMEF19Q5SWL8 479 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 NCAPH2Q6IBW4 605 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 SCFD2Q8WU76 684 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 CCSER1Q9C0I3 900 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 SORBS3O60504 671 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 PTGS1P23219 599 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 HOXD10P28358 340 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 KCNV1Q6PIU1 500 aa24.21■■□□□ 1.47
TPM1-204ENST00000334895 FMR1NBQ8N0W7 255 aaPredicted RBP24.21■■□□□ 1.47
TPM1-204ENST00000334895 ZHX1Q9UKY1 873 aaPredicted RBP24.21■■□□□ 1.47
TPM1-204ENST00000334895 NR1I2O75469 434 aa24.2■■□□□ 1.46
TPM1-204ENST00000334895 MBD3O95983 291 aa24.2■■□□□ 1.46
TPM1-204ENST00000334895 ZNF865P0CJ78 1059 aaPredicted RBP24.2■■□□□ 1.46
TPM1-204ENST00000334895 ADCYAP1R1P41586 468 aa24.2■■□□□ 1.46
TPM1-204ENST00000334895 SDF4Q9BRK5 362 aa24.2■■□□□ 1.46
TPM1-204ENST00000334895 FAM13BQ9NYF5 915 aa24.2■■□□□ 1.46
TPM1-204ENST00000334895 KCNH3Q9ULD8 1083 aa24.2■■□□□ 1.46
TPM1-204ENST00000334895 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.19■■□□□ 1.46
TPM1-204ENST00000334895 FARP2O94887 1054 aaPredicted RBP24.19■■□□□ 1.46
TPM1-204ENST00000334895 TXNP10599 105 aaKnown RBP24.19■■□□□ 1.46
TPM1-204ENST00000334895 UBA7P41226 1012 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 FAM160A1Q05DH4 1040 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 TTLL4Q14679 1199 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 KARSQ15046 597 aaKnown RBP24.19■■□□□ 1.46
TPM1-204ENST00000334895 ARHGEF6Q15052 776 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 CCDC73Q6ZRK6 1079 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 CYFIP1Q7L576 1253 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 CABP7Q86V35 215 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 COPS5Q92905 334 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 PANK2Q9BZ23 570 aa24.19■■□□□ 1.46
TPM1-204ENST00000334895 JPH1Q9HDC5 661 aaPredicted RBP24.19■■□□□ 1.46
TPM1-204ENST00000334895 TRAK2O60296 914 aa24.18■■□□□ 1.46
TPM1-204ENST00000334895 GGPS1O95749 300 aa24.18■■□□□ 1.46
TPM1-204ENST00000334895 KRT76Q01546 638 aa24.18■■□□□ 1.46
TPM1-204ENST00000334895 ECM1Q16610 540 aa24.18■■□□□ 1.46
TPM1-204ENST00000334895 SNX29Q8TEQ0 813 aa24.18■■□□□ 1.46
TPM1-204ENST00000334895 LRRC15Q8TF66 581 aa24.18■■□□□ 1.46
TPM1-204ENST00000334895 ADCY6O43306 1168 aa24.17■■□□□ 1.46
TPM1-204ENST00000334895 ELNP15502 786 aa24.17■■□□□ 1.46
TPM1-204ENST00000334895 TRIM32Q13049 653 aa24.17■■□□□ 1.46
TPM1-204ENST00000334895 NEDD9Q14511 834 aa24.17■■□□□ 1.46
TPM1-204ENST00000334895 KLHL40Q2TBA0 621 aa24.17■■□□□ 1.46
TPM1-204ENST00000334895 CCDC144BQ3MJ40 725 aa24.17■■□□□ 1.46
TPM1-204ENST00000334895 GJC2Q5T442 439 aaPredicted RBP24.17■■□□□ 1.46
TPM1-204ENST00000334895 ZNF746Q6NUN9 644 aaPredicted RBP24.17■■□□□ 1.46
TPM1-204ENST00000334895 PDILTQ8N807 584 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms