RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ZSCAN10Q96SZ4 725 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 ETNK1Q9HBU6 452 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 MLXIPLQ9NP71 852 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 PICK1Q9NRD5 415 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 DDX25Q9UHL0 483 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 HSPA6P17066 643 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 DDIT3P35638 169 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 CYP27A1Q02318 531 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 CEP55Q53EZ4 464 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 FAM47CQ5HY64 1035 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 ZNF658Q5TYW1 1059 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 APOBEC2Q9Y235 224 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 SERPING1P05155 500 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 DDB1Q16531 1140 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 RNF207Q6ZRF8 634 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 EPM2AIP1Q7L775 607 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 NEK8Q86SG6 692 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 GFM2Q969S9 779 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 ATP8A2Q9NTI2 1148 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 TMOD4Q9NZQ9 345 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 DENND4BO75064 1496 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 MAPKBP1O60336 1514 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 TRIM66O15016 1216 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 ZBTB24O43167 697 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 E2F6O75461 281 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 HLA-DPA1P20036 260 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 KPNA2P52292 529 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 CUL3Q13618 768 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 SLC39A14Q15043 492 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 MAN2A1Q16706 1144 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 NCLNQ969V3 563 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 EPC1Q9H2F5 836 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 PLCH2O75038 1416 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 RNMTO43148 476 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 TAF5LO75529 589 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 CD2BP2O95400 341 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 PDIA3P30101 505 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 MRPL28Q13084 256 aaKnown RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 CCDC85BQ15834 202 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 ARHGAP27Q6ZUM4 889 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
COL4A6-201ENST00000334504 PYROXD1Q8WU10 500 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 STAMBPL1Q96FJ0 436 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 LRRC37BQ96QE4 947 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 GIMAP4Q9NUV9 329 aa10.57□□□□□ -0.72
COL4A6-201ENST00000334504 USP19O94966 1318 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 IFRD2Q12894 506 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 THOC5Q13769 683 aaKnown RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 LRRC41Q15345 812 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 TTC30AQ86WT1 665 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 ENAHQ8N8S7 591 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 DNAAF3Q8N9W5 541 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 ASCC2Q9H1I8 757 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 COL4A3BPQ9Y5P4 624 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 TOP2BQ02880 1626 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 LRRN2O75325 713 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 PDE6AP16499 860 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 TMED10P49755 219 aaKnown RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 FSCBQ5H9T9 825 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 CENPUQ71F23 418 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 IL17RAQ96F46 866 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 INPP5FQ9Y2H2 1132 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 RTCBQ9Y3I0 505 aaKnown RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 FRMPD2Q68DX3 1309 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 CCDC195A0A1B0GUA6 201 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 RASA4BC9J798 803 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 RASA4O43374 803 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 ZRANB2O95218 330 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 APOA1P02647 267 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 SCG2P13521 617 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 YWHAHQ04917 246 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 FANCBQ8NB91 859 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 SAYSD1Q9NPB0 183 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 HESX1Q9UBX0 185 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 RWDD2AQ9UIY3 292 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 MAGI1Q96QZ7 1491 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 CTIFO43310 598 aaKnown RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 KRT8P05787 483 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 CPXCR1Q8N123 301 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 PLBD2Q8NHP8 589 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 TGS1Q96RS0 853 aaKnown RBP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 FTOQ9C0B1 505 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL4A6-201ENST00000334504 EHD2Q9NZN4 543 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 DCTN4Q9UJW0 460 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 COPEO14579 308 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 ATP5JP18859 108 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 NR2F2P24468 414 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 CCDC15Q0P6D6 951 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 TMEM154Q6P9G4 183 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 MAPKAPK5Q8IW41 473 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 RNF217Q8TC41 542 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 NT5C1BQ96P26 610 aa10.56□□□□□ -0.72
COL4A6-201ENST00000334504 RNF103-CHMP3A0A140T963 221 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 PSMD7P51665 324 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 ZBED6P86452 979 aa10.55□□□□□ -0.72
COL4A6-201ENST00000334504 KRT31Q15323 416 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms