RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 GNA11P29992 359 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 PDIA3P30101 505 aaKnown RBP14.02□□□□□ -0.17
CMTM1-203ENST00000333001 CCL23P55773 120 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 ANAPC15P60006 121 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 UBE2SQ16763 222 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 CPLX2Q6PUV4 134 aaKnown RBP14.02□□□□□ -0.17
CMTM1-203ENST00000333001 ZNF365Q70YC5 407 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 C16orf59Q7L2K0 433 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 CYFIP1Q7L576 1253 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 HERVK_113Q902F9 699 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 ZNF274Q96GC6 653 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-203ENST00000333001 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-203ENST00000333001 ALG1Q9BT22 464 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 COL25A1Q9BXS0 654 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-203ENST00000333001 RNF26Q9BY78 433 aaPredicted RBP14.02□□□□□ -0.17
CMTM1-203ENST00000333001 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.17
CMTM1-203ENST00000333001 C6orf50Q9HD87 102 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 UBIAD1Q9Y5Z9 338 aa14.02□□□□□ -0.17
CMTM1-203ENST00000333001 CDH23Q9H251 3354 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 ACTN1P12814 892 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 IFNAR1P17181 557 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 SEMA3FQ13275 785 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 MTMR1Q13613 665 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 RASIP1Q5U651 963 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 TRIM22Q8IYM9 498 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 BICD2Q8TD16 824 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 AFAP1L1Q8TED9 768 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 GUCD1Q96NT3 240 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 C16orf70Q9BSU1 422 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 JADE2Q9NQC1 790 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 PDRG1Q9NUG6 133 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 HDAC6Q9UBN7 1215 aa14.01□□□□□ -0.17
CMTM1-203ENST00000333001 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
CMTM1-203ENST00000333001 TRIP12Q14669 1992 aaPredicted RBP14□□□□□ -0.17
CMTM1-203ENST00000333001 UMODL1Q5DID0 1318 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 CPLX1O14810 134 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 LGALS2P05162 132 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 IQCF3P0C7M6 154 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 ZNF286BP0CG31 522 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 ACRP10323 421 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 GNAT1P11488 350 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 ITGB5P18084 799 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 RBL2Q08999 1139 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 PTK7Q13308 1070 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 GDF6Q6KF10 455 aaPredicted RBP14□□□□□ -0.17
CMTM1-203ENST00000333001 TYW1BQ6NUM6 668 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 CCDC148Q8NFR7 591 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 GPR20Q99678 358 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 MXRA8Q9BRK3 442 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 ANO3Q9BYT9 981 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 ZMYND12Q9H0C1 365 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 KAT6AQ92794 2004 aa14□□□□□ -0.17
CMTM1-203ENST00000333001 SORBS3O60504 671 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 KCNA2P16389 499 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 ZNF76P36508 570 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 SREBF1P36956 1147 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 CLK2P49760 499 aaKnown RBP13.99□□□□□ -0.17
CMTM1-203ENST00000333001 CCT2P78371 535 aaKnown RBP13.99□□□□□ -0.17
CMTM1-203ENST00000333001 SSRP1Q08945 709 aaKnown RBP13.99□□□□□ -0.17
CMTM1-203ENST00000333001 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
CMTM1-203ENST00000333001 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 NTRK3Q16288 839 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 CEP55Q53EZ4 464 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 NIPA1Q7RTP0 329 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 FAM177A1Q8N128 213 aaPredicted RBP13.99□□□□□ -0.17
CMTM1-203ENST00000333001 SEPT1Q8WYJ6 367 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 TNPO1Q92973 898 aaKnown RBP13.99□□□□□ -0.17
CMTM1-203ENST00000333001 SCLYQ96I15 445 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 SH3GLB2Q9NR46 395 aa13.99□□□□□ -0.17
CMTM1-203ENST00000333001 C17orf102A2RUQ5 167 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 SELPP16109 830 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 PKN1Q16512 942 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 REXO1Q8N1G1 1221 aaKnown RBP13.98□□□□□ -0.17
CMTM1-203ENST00000333001 MAFAQ8NHW3 353 aaPredicted RBP13.98□□□□□ -0.17
CMTM1-203ENST00000333001 PHKBQ93100 1093 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 SDF4Q9BRK5 362 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 SLC26A6Q9BXS9 759 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 UPF3BQ9BZI7 483 aaKnown RBP13.98□□□□□ -0.17
CMTM1-203ENST00000333001 KCNH7Q9NS40 1196 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 SLC4A7Q9Y6M7 1214 aa13.98□□□□□ -0.17
CMTM1-203ENST00000333001 NFASCO94856 1347 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 MEIS1O00470 390 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 ATP9AO75110 1047 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 CDKL5O76039 1030 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 CYP3A4P08684 503 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 TCF7P36402 384 aaPredicted RBP13.97□□□□□ -0.17
CMTM1-203ENST00000333001 ARHGAP4P98171 946 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 RAB30Q15771 203 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 OTOP2Q7RTS6 562 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 DEFB128Q7Z7B8 93 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 PPP1R13LQ8WUF5 828 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 ATP6V0A1Q93050 837 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 CDX2Q99626 313 aaPredicted RBP13.97□□□□□ -0.17
CMTM1-203ENST00000333001 C22orf23Q9BZE7 217 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 FTOQ9C0B1 505 aaKnown RBP eCLIP13.97□□□□□ -0.17
CMTM1-203ENST00000333001 SEMA6BQ9H3T3 888 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 BCAS3Q9H6U6 928 aa13.97□□□□□ -0.17
CMTM1-203ENST00000333001 JPH1Q9HDC5 661 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms