RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 KIAA0391O15091 583 aaKnown RBP12.45□□□□□ -0.42
COL4A5-201ENST00000328300 RNF8O76064 485 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 PLEKHA8P1O95397 391 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 PLCG1P19174 1290 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 PHBP35232 272 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 ZBED6P86452 979 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 MYO1EQ12965 1108 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 FYB2Q5VWT5 728 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 SEPT14Q6ZU15 432 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 C2orf40Q9H1Z8 148 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 SERPINA10Q9UK55 444 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
COL4A5-201ENST00000328300 CAPN2P17655 700 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 CLEC17AQ6ZS10 378 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 INTS8Q75QN2 995 aaKnown RBP12.45□□□□□ -0.42
COL4A5-201ENST00000328300 DAAM2Q86T65 1068 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
COL4A5-201ENST00000328300 ATP2C2O75185 946 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 CNGA1P29973 690 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 ELMSAN1Q6PJG2 1045 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 ATRIPQ8WXE1 791 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 TDRD3Q9H7E2 651 aaKnown RBP12.45□□□□□ -0.42
COL4A5-201ENST00000328300 ACAD9Q9H845 621 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 AKT3Q9Y243 479 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 PCDHB6Q9Y5E3 794 aa12.45□□□□□ -0.42
COL4A5-201ENST00000328300 ASB14A6NK59 587 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 ZSCAN20P17040 1043 aaPredicted RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 CYB5R4Q7L1T6 521 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 PPM1KQ8N3J5 372 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 AGBL3Q8NEM8 1001 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 RASGRP4Q8TDF6 673 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 UBN2Q6ZU65 1347 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 PPM1FP49593 454 aaPredicted RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 ETF1P62495 437 aaKnown RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 TRIM50Q86XT4 487 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 RDH13Q8NBN7 331 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 RAB3IL1Q8TBN0 382 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 GJA10Q969M2 543 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 MRPL47Q9HD33 250 aaKnown RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 EBAG9O00559 213 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 RFX1P22670 979 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 EXOSC10Q01780 885 aaKnown RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 KRT81Q14533 505 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 CCDC121Q6ZUS5 278 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 SAMD3Q8N6K7 520 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 PANX2Q96RD6 677 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 MROH1Q8NDA8 1641 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 COL3A1P02461 1466 aaPredicted RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 TBX3O15119 743 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 PFDN6O15212 129 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 SMAP1Q8IYB5 467 aaPredicted RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 CEP95Q96GE4 821 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.44□□□□□ -0.425e-7■■■■■ 42.9
COL4A5-201ENST00000328300 NWD1Q149M9 1564 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 HOXD10P28358 340 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 CDC42EP1Q00587 391 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 PDIA6Q15084 440 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 CFAP157Q5JU67 520 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 SPOUT1Q5T280 376 aaKnown RBP12.44□□□□□ -0.42
COL4A5-201ENST00000328300 RINT1Q6NUQ1 792 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 PDXDC2PQ6P474 469 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 WRNIP1Q96S55 665 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 USTQ9Y2C2 406 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
COL4A5-201ENST00000328300 MTMR1Q13613 665 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 CUL4BQ13620 913 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 XRRA1Q6P2D8 792 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 CPLX4Q7Z7G2 160 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 MICALL1Q8N3F8 863 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 PAIP2Q9BPZ3 127 aaKnown RBP12.43□□□□□ -0.42
COL4A5-201ENST00000328300 CARD6Q9BX69 1037 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 DAGLAQ9Y4D2 1042 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 ZNF189O75820 626 aaPredicted RBP12.43□□□□□ -0.42
COL4A5-201ENST00000328300 DDIT3P35638 169 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 AP3M2P53677 418 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 ZBTB16Q05516 673 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 CCDC110Q8TBZ0 833 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 CCHCR1Q8TD31 782 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 HOMER3Q9NSC5 361 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 EFCAB8A8MWE9 144 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
COL4A5-201ENST00000328300 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
COL4A5-201ENST00000328300 ADKP55263 362 aaKnown RBP12.43□□□□□ -0.42
COL4A5-201ENST00000328300 PKP1Q13835 747 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 MB21D1Q8N884 522 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 FBF1Q8TES7 1133 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 MMS19Q96T76 1030 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 VPS33BQ9H267 617 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 ANAPC4Q9UJX5 808 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 CAPN9O14815 690 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 LARGE1O95461 756 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 PDIA5Q14554 519 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 B4GALNT4Q76KP1 1039 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 FAM151AQ8WW52 585 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 RAD54LQ92698 747 aa12.43□□□□□ -0.42
COL4A5-201ENST00000328300 ANKFY1Q9P2R3 1169 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms