RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 HGSNATQ68CP4 663 aa21.97■■□□□ 1.11
SOX2-201ENST00000325404 NOX5Q96PH1 765 aa21.97■■□□□ 1.11
SOX2-201ENST00000325404 MLXIPQ9HAP2 919 aa21.97■■□□□ 1.11
SOX2-201ENST00000325404 POTEMA6NI47 508 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 CACNA2D4Q7Z3S7 1137 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 CUL5Q93034 780 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 DBNDD1Q9H9R9 158 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 JMJD4Q9H9V9 463 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 SLX4Q8IY92 1834 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 TTLL1O95922 423 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 KCNMA1Q12791 1236 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 COASYQ13057 564 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 GPATCH4Q5T3I0 446 aaKnown RBP21.96■■□□□ 1.11
SOX2-201ENST00000325404 HAS1Q92839 578 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 MTMR8Q96EF0 704 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 NUDT12Q9BQG2 462 aa21.96■■□□□ 1.11
SOX2-201ENST00000325404 DDX25Q9UHL0 483 aaKnown RBP21.96■■□□□ 1.11
SOX2-201ENST00000325404 FRMPD2Q68DX3 1309 aaPredicted RBP21.95■■□□□ 1.1
SOX2-201ENST00000325404 PHACTR2O75167 634 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 SERPING1P05155 500 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 MYBL2P10244 700 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 PAFAH1B1P43034 410 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 SLC9C1Q4G0N8 1177 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 EMBQ6PCB8 327 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 KCNK18Q7Z418 384 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 SRLQ86TD4 932 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 ZC3H3Q8IXZ2 948 aaKnown RBP21.95■■□□□ 1.1
SOX2-201ENST00000325404 AGPSO00116 658 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 FAM26FQ5R3K3 315 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 SMCR8Q8TEV9 937 aaPredicted RBP21.95■■□□□ 1.1
SOX2-201ENST00000325404 MXD3Q9BW11 206 aa21.95■■□□□ 1.1
SOX2-201ENST00000325404 GGCXP38435 758 aa21.94■■□□□ 1.1
SOX2-201ENST00000325404 NNTQ13423 1086 aa21.94■■□□□ 1.1
SOX2-201ENST00000325404 PDGFDQ9GZP0 370 aaPredicted RBP21.94■■□□□ 1.1
SOX2-201ENST00000325404 PANK4Q9NVE7 773 aa21.94■■□□□ 1.1
SOX2-201ENST00000325404 FEZ2Q9UHY8 353 aaPredicted RBP21.94■■□□□ 1.1
SOX2-201ENST00000325404 SHOX2O60902 331 aaPredicted RBP21.94■■□□□ 1.1
SOX2-201ENST00000325404 TNNI2P48788 182 aa21.94■■□□□ 1.1
SOX2-201ENST00000325404 CC2D2BQ6DHV5 1058 aa21.94■■□□□ 1.1
SOX2-201ENST00000325404 LRRC31Q6UY01 552 aa21.94■■□□□ 1.1
SOX2-201ENST00000325404 ADGRF4Q8IZF3 695 aa21.94■■□□□ 1.1
SOX2-201ENST00000325404 GOLGA6BA6NDN3 693 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 EPHB4P54760 987 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 SFMBT2Q5VUG0 894 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 CCDC65Q8IXS2 484 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 C7orf43Q8WVR3 580 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 CAVIN3Q969G5 261 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 LRRC1Q9BTT6 524 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 TLR10Q9BXR5 811 aa21.93■■□□□ 1.1
SOX2-201ENST00000325404 ATF5Q9Y2D1 282 aaPredicted RBP21.93■■□□□ 1.1
SOX2-201ENST00000325404 AKR1B1P15121 316 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 CCDC181Q5TID7 509 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 ALS2CLQ60I27 953 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 PPP4R3CPQ6ZMV5 832 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 TRIM59Q8IWR1 403 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 STIM2Q9P246 746 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 PCDHA12Q9UN75 941 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 PCDHA2Q9Y5H9 948 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 ZMYND10O75800 440 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 NOL4O94818 638 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 SCNN1DP51172 638 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 ECM1Q16610 540 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 CCDC40Q4G0X9 1142 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 FAM83BQ5T0W9 1011 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 KLHDC7AQ5VTJ3 777 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 HHIPL2Q6UWX4 724 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 TEKT1Q969V4 418 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 SH3GL2Q99962 352 aa21.92■■□□□ 1.1
SOX2-201ENST00000325404 RRP15Q9Y3B9 282 aaKnown RBP21.92■■□□□ 1.1
SOX2-201ENST00000325404 MYO1CO00159 1063 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 TRAF5O00463 557 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 ZBTB5O15062 677 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 PPFIA4O75335 1185 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 EPB41P11171 864 aaKnown RBP21.91■■□□□ 1.1
SOX2-201ENST00000325404 CFAP221Q4G0U5 840 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 NFRKBQ6P4R8 1299 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 LRRC47Q8N1G4 583 aaKnown RBP21.91■■□□□ 1.1
SOX2-201ENST00000325404 GOLGA8KD6RF30 607 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 ECE2O60344 883 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 PPP1R11O60927 126 aaPredicted RBP21.91■■□□□ 1.1
SOX2-201ENST00000325404 USP11P51784 963 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 LRRC41Q15345 812 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 STRIP1Q5VSL9 837 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 FAM76AQ8TAV0 307 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 TANGO6Q9C0B7 1094 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 GPCPD1Q9NPB8 672 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 AIPL1Q9NZN9 384 aa21.91■■□□□ 1.1
SOX2-201ENST00000325404 DMGDHQ9UI17 866 aaKnown RBP21.91■■□□□ 1.1
SOX2-201ENST00000325404 CYP3A7-CYP3A51PA0A087WV96 503 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 FRMD3A2A2Y4 597 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 GRID2IPA4D2P6 1211 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 OPA1O60313 960 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 CYP3A7P24462 503 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 GFPT1Q06210 699 aaPredicted RBP21.9■■□□□ 1.1
SOX2-201ENST00000325404 PICALMQ13492 652 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 NAB2Q15742 525 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 EDRF1Q3B7T1 1238 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 HAUS3Q68CZ6 603 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 MOXD1Q6UVY6 613 aa21.9■■□□□ 1.1
SOX2-201ENST00000325404 GBP6Q6ZN66 633 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms