RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FAM81AQ8TBF8 368 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 NLRC4Q9NPP4 1024 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 KCND1Q9NSA2 647 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ADGRG1Q9Y653 693 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 CCT8L1PA6NM43 557 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 SCTRP47872 440 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 TMED10P49755 219 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 PLTPP55058 493 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 SNX16P57768 344 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 LETM2Q2VYF4 491 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 KCNV2Q8TDN2 545 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 AK8Q96MA6 479 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 E2F6O75461 281 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ACSL3O95573 720 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 GRAMD1BQ3KR37 738 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 REXO1Q8N1G1 1221 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 PGBD1Q96JS3 809 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 TEX13AQ9BXU3 409 aaPredicted RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 GCNT4Q9P109 453 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 PTGDRQ13258 359 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 SNX1Q13596 522 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 KRT25Q7Z3Z0 450 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 U2AF1L4Q8WU68 220 aaKnown RBP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 FTOQ9C0B1 505 aaKnown RBP eCLIP7.63□□□□□ -1.19
SMC1A-201ENST00000322213 TRAF3IP3Q9Y228 551 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 SSX2IPQ9Y2D8 614 aa7.63□□□□□ -1.19
SMC1A-201ENST00000322213 ABCB4P21439 1286 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 KRT24Q2M2I5 525 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 G2E3Q7L622 706 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ALDH8A1Q9H2A2 487 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 VPS54Q9P1Q0 977 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 KCNJ14Q9UNX9 436 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ARL2BPQ9Y2Y0 163 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 AGBL2Q5U5Z8 902 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 AGGF1Q8N302 714 aaeCLIP7.62□□□□□ -1.193e-8■■□□□ 13.3
SMC1A-201ENST00000322213 TEKT1Q969V4 418 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ZNF711Q9Y462 761 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 USP15Q9Y4E8 981 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ITIH6Q6UXX5 1313 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 LGALS16A8MUM7 142 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ARL1P40616 181 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 CUL4BQ13620 913 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ATG16L1Q676U5 607 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 TMEM154Q6P9G4 183 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 KDM7AQ6ZMT4 941 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 SMYD4Q8IYR2 804 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 MYOCDQ8IZQ8 938 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 TUBA8Q9NY65 449 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 CKAP5Q14008 2032 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 hCG_2014768A0A024R1R8 64 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 AP1G2O75843 785 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 PRPF6O94906 941 aaKnown RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 HSPD1P10809 573 aaKnown RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 HSPA9P38646 679 aaKnown RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 SERPINB10P48595 397 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 MAN2A1Q16706 1144 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 TOM1L2Q6ZVM7 507 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 TTC25Q96NG3 672 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 METTL22Q9BUU2 404 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 UNC45AQ9H3U1 944 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 PLA2R1Q13018 1463 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ADGRB3O60242 1522 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 TCP11X1B4DZS4 312 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 TRPA1O75762 1119 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ESRRBO95718 433 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 INHBAP08476 426 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 KRT10P13645 584 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 EIF4A3P38919 411 aaKnown RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ARMCX3Q9UH62 379 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 MCM8Q9UJA3 840 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 FSBPO95073 299 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ANP32DO95626 131 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 RBM5P52756 815 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 LRRC63Q05C16 580 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 PUM3Q15397 648 aaKnown RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 HEATR1Q9H583 2144 aaKnown RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 FMNL1O95466 1100 aaPredicted RBP7.62□□□□□ -1.19
SMC1A-201ENST00000322213 NFRKBQ6P4R8 1299 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 DNAJC9Q8WXX5 260 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 USP44Q9H0E7 712 aa7.62□□□□□ -1.19
SMC1A-201ENST00000322213 ACEP12821 1306 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 KLHL33A6NCF5 533 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 MMP1P03956 469 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 HLA-DOAP06340 250 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 MRPS25P82663 173 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 MTHFSDQ2M296 383 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 OLFML2BQ68BL8 750 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 OTUD7BQ6GQQ9 843 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 SIRT2Q8IXJ6 389 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 TBK1Q9UHD2 729 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 PALMO75781 387 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 GSTA1P08263 222 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 SLCO1A2P46721 670 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 ZC3H15Q8WU90 426 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 TRIM55Q9BYV6 548 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 TRPC6Q9Y210 931 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 SRPRBQ9Y5M8 271 aaKnown RBP7.61□□□□□ -1.19
SMC1A-201ENST00000322213 SCN9AQ15858 1988 aa7.61□□□□□ -1.19
SMC1A-201ENST00000322213 CD109Q6YHK3 1445 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms