RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 ATP11AP98196 1134 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 DYNC1I2Q13409 638 aaKnown RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 PSMD6Q15008 389 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 MCMDC2Q4G0Z9 681 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 HHATQ5VTY9 493 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 PACS2Q86VP3 889 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 APLFQ8IW19 511 aaPredicted RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 SEPT12Q8IYM1 358 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 C17orf50Q8WW18 174 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 TBC1D31Q96DN5 1066 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 SPATA17Q96L03 361 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 SEC63Q9UGP8 760 aaKnown RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 ATF5Q9Y2D1 282 aaPredicted RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 NUB1Q9Y5A7 615 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 ZNF831Q5JPB2 1677 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 ARFGEF2Q9Y6D5 1785 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 GCOM1H8Y6P7 765 aaPredicted RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 EXOC5O00471 708 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 ZNF213O14771 459 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 IFIT3O14879 490 aaKnown RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 ZNF263O14978 683 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 DNAJC8O75937 253 aaPredicted RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 MYZAPP0CAP1 466 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 ATP1A2P50993 1020 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 BLVRAP53004 296 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 ARMC3Q5W041 872 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 USP17L2Q6R6M4 530 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 HDXQ7Z353 690 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 TC2NQ8N9U0 490 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 RAD54LQ92698 747 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 PPP1R16BQ96T49 567 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 ZHX3Q9H4I2 956 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 CSPG4Q6UVK1 2322 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 TAF1LQ8IZX4 1826 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 PLXNA2O75051 1894 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 TLN1Q9Y490 2541 aaKnown RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 A8MUI8 341 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 DDX39AO00148 427 aaKnown RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 SCP2P22307 547 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 PRPHP41219 470 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 NLRP5P59047 1200 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 CHMP4BP1P59074 171 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 CFAP100Q494V2 611 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 TEX11Q8IYF3 940 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 SPICE1Q8N0Z3 855 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 SRBD1Q8N5C6 995 aaKnown RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 BTBD6Q96KE9 485 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 SERPINC1P01008 464 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 PTPAQ15257 358 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 IFI16Q16666 785 aaKnown RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 BAG1Q99933 345 aaPredicted RBP3.97□□□□□ -1.77
GEN1-201ENST00000317402 EHMT1Q9H9B1 1298 aa3.97□□□□□ -1.77
GEN1-201ENST00000317402 ASTN2O75129 1339 aaPredicted RBP3.96□□□□□ -1.77
GEN1-201ENST00000317402 BPTFQ12830 3046 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 MED23Q9ULK4 1368 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 RGPD2P0DJD1 1756 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 A0A087WUV0 522 aaPredicted RBP3.96□□□□□ -1.77
GEN1-201ENST00000317402 RBM5P52756 815 aaKnown RBP eCLIP3.96□□□□□ -1.77
GEN1-201ENST00000317402 POLE2P56282 527 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 COG2Q14746 738 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 STK38Q15208 465 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 GJC2Q5T442 439 aaPredicted RBP3.96□□□□□ -1.77
GEN1-201ENST00000317402 APBB1IPQ7Z5R6 666 aaPredicted RBP3.96□□□□□ -1.77
GEN1-201ENST00000317402 NLRP10Q86W26 655 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 ANKRD13AQ8IZ07 590 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 MSL3Q8N5Y2 521 aaKnown RBP3.96□□□□□ -1.77
GEN1-201ENST00000317402 ZNF652Q9Y2D9 606 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 PARP3Q9Y6F1 533 aa3.96□□□□□ -1.77
GEN1-201ENST00000317402 TACC1O75410 805 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 RPSAP08865 295 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 PKN1Q16512 942 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 CCDC14Q49A88 953 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 HP1BP3Q5SSJ5 553 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 PPP4R3AQ6IN85 833 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 KIFC2Q96AC6 838 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 NAA15Q9BXJ9 866 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 FAF1Q9UNN5 650 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 GREB1LQ9C091 1923 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 BASP1P80723 227 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 CLEC17AQ6ZS10 378 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 UBE2Q1Q7Z7E8 422 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.96□□□□□ -1.78
GEN1-201ENST00000317402 MRRFQ96E11 262 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 YIPF3Q9GZM5 350 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 C19orf44Q9H6X5 657 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 PFDN4Q9NQP4 134 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 BSDC1Q9NW68 430 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 ZBTB21Q9ULJ3 1066 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 ANGEL1Q9UNK9 670 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 LAMB2P55268 1798 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 hCG_2014768A0A024R1R8 64 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 USO1O60763 962 aaKnown RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 PGGT1BP53609 377 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 HERVK_113P62684 666 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 CFAP157Q5JU67 520 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 KCTD1Q719H9 257 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 CTCFLQ8NI51 663 aaPredicted RBP3.96□□□□□ -1.78
GEN1-201ENST00000317402 LACRTQ9GZZ8 138 aa3.96□□□□□ -1.78
GEN1-201ENST00000317402 CD248Q9HCU0 757 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms