RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 KLHL40Q2TBA0 621 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 RBM46Q8TBY0 533 aaKnown RBP9.85□□□□□ -0.83
CTC1-201ENST00000315684 LRRC4BQ9NT99 713 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.85□□□□□ -0.83
CTC1-201ENST00000315684 PCDHB6Q9Y5E3 794 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 TAL1P17542 331 aaPredicted RBP9.85□□□□□ -0.83
CTC1-201ENST00000315684 PPFIA1Q13136 1202 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 RAB3IL1Q8TBN0 382 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 NRXN1Q9ULB1 1477 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 CTAGE9A4FU28 777 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 MAN1A1P33908 653 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 NDUFA8P51970 172 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 CDO1Q16878 200 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 THEM5Q8N1Q8 247 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 PGBD3Q8N328 593 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 LRRC7Q96NW7 1537 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 ATP2C2O75185 946 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 NDUFB10O96000 172 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 ZNF18P17022 549 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 CCDC155Q8N6L0 562 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 GIMAP8Q8ND71 665 aaPredicted RBP9.85□□□□□ -0.83
CTC1-201ENST00000315684 SELENOSQ9BQE4 189 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 RHOXF2BP0C7M4 288 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 NR2F2P24468 414 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 CYP27A1Q02318 531 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 CKAP4Q07065 602 aaKnown RBP9.85□□□□□ -0.83
CTC1-201ENST00000315684 AGBL3Q8NEM8 1001 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 RHOXF2Q9BQY4 288 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 ATP6V0A4Q9HBG4 840 aa9.85□□□□□ -0.83
CTC1-201ENST00000315684 VPS41P49754 854 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 NLRP12P59046 1061 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 TXNRD3Q86VQ6 643 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 POTEDQ86YR6 584 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 RNF208Q9H0X6 261 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 CPSF3Q9UKF6 684 aaKnown RBP9.84□□□□□ -0.83
CTC1-201ENST00000315684 DISP2A7MBM2 1401 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 NFIAQ12857 509 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 CAPN12Q6ZSI9 719 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.831e-323■■■■□ 24.2
CTC1-201ENST00000315684 SLC38A10Q9HBR0 1119 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 ERICH4A6NGS2 130 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 PLCG1P19174 1290 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 THPOP40225 353 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 PHKA2P46019 1235 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 FANCCQ00597 558 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 TNFAIP2Q03169 654 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 PPP2R3AQ06190 1150 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 TCP11Q8WWU5 503 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 SREK1Q8WXA9 508 aaKnown RBP9.84□□□□□ -0.83
CTC1-201ENST00000315684 CCT6BQ92526 530 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 TEX13BQ9BXU2 312 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 KCNJ18B7U540 433 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 C19orf81C9J6K1 198 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 IFNB1P01574 187 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 KCNJ12Q14500 433 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 VWA3BQ502W6 1294 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 SYT17Q9BSW7 474 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 GCOM2Q9BZD3 368 aaPredicted RBP9.84□□□□□ -0.83
CTC1-201ENST00000315684 ZC3H13Q5T200 1668 aaKnown RBP9.84□□□□□ -0.83
CTC1-201ENST00000315684 PPP1R2P41236 205 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 PSMC4P43686 418 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 PRELPP51888 382 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 MAPK6Q16659 721 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 SIX6OS1Q8N1H7 587 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 CCDC89Q8N998 374 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 TTC14Q96N46 770 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 BAG1Q99933 345 aaPredicted RBP9.84□□□□□ -0.83
CTC1-201ENST00000315684 POLR3FQ9H1D9 316 aaPredicted RBP9.84□□□□□ -0.83
CTC1-201ENST00000315684 PARVGQ9HBI0 331 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 PFDN4Q9NQP4 134 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 IQGAP1P46940 1657 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 PIK3R2O00459 728 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 TBC1D8O95759 1140 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 MTX1Q13505 466 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 ATL3Q6DD88 541 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 RWDD4Q6NW29 188 aaKnown RBP9.84□□□□□ -0.83
CTC1-201ENST00000315684 GBP6Q6ZN66 633 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 KCNK9Q9NPC2 374 aa9.84□□□□□ -0.83
CTC1-201ENST00000315684 CLDN3O15551 220 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 BUB1O43683 1085 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 STAT1P42224 750 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 ACER1Q8TDN7 264 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 TMEM143Q96AN5 459 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 SLC9A2Q9UBY0 812 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 AFG3L2Q9Y4W6 797 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 GOLGA8CPA6NN73 597 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 MMP1P03956 469 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 DDR1Q08345 913 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 GOLGA8FQ08AF8 430 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 GOLGA8DPQ0D2H9 430 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 ACCSLQ4AC99 568 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 SCYL3Q8IZE3 742 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 GLT1D1Q96MS3 346 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 PCDHB7Q9Y5E2 793 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 WDR64B1ANS9 1081 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 IPO5O00410 1097 aaKnown RBP9.83□□□□□ -0.84
CTC1-201ENST00000315684 TADA2AO75478 443 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 LONP1P36776 959 aaKnown RBP9.83□□□□□ -0.84
CTC1-201ENST00000315684 RGS2P41220 211 aa9.83□□□□□ -0.84
CTC1-201ENST00000315684 ADKP55263 362 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms