RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 Q9H521 79 aa13.38□□□□□ -0.27
EBF1-201ENST00000313708 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
EBF1-201ENST00000313708 GALNT8Q9NY28 637 aa13.38□□□□□ -0.27
EBF1-201ENST00000313708 ATP6V0A2Q9Y487 856 aa13.38□□□□□ -0.27
EBF1-201ENST00000313708 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
EBF1-201ENST00000313708 MAST3O60307 1309 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 MGRN1O60291 552 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 RNF220Q5VTB9 566 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 ANKRD27Q96NW4 1050 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 LRRC53A6NM62 1247 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 CYLC2Q14093 348 aaPredicted RBP13.37□□□□□ -0.27
EBF1-201ENST00000313708 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 PPP1R21Q6ZMI0 780 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 ABCF3Q9NUQ8 709 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 DNAJC17Q9NVM6 304 aaKnown RBP13.37□□□□□ -0.27
EBF1-201ENST00000313708 TARSP26639 723 aaKnown RBP13.37□□□□□ -0.27
EBF1-201ENST00000313708 AMPD2Q01433 879 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 PPP2R5EQ16537 467 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 SV2BQ7L1I2 683 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 P2RX5Q93086 422 aa13.37□□□□□ -0.27
EBF1-201ENST00000313708 NMD3Q96D46 503 aaKnown RBP13.37□□□□□ -0.27
EBF1-201ENST00000313708 DYTNA2CJ06 578 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 SPOPO43791 374 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 ESRRAP11474 423 aaPredicted RBP13.36□□□□□ -0.27
EBF1-201ENST00000313708 TMED2Q15363 201 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 CAPN12Q6ZSI9 719 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 ESR2Q92731 530 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 CCDC188H7C350 402 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 GJC1P36383 396 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 SLC1A4P43007 532 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
EBF1-201ENST00000313708 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 NDNQ99608 321 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 FGGP02679 453 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 ATP2A1O14983 1001 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 ACADSP16219 412 aa13.36□□□□□ -0.27
EBF1-201ENST00000313708 TMED10P49755 219 aaKnown RBP13.36□□□□□ -0.27
EBF1-201ENST00000313708 DBR1Q9UK59 544 aaKnown RBP13.36□□□□□ -0.27
EBF1-201ENST00000313708 RCN1Q15293 331 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 SH3TC1Q8TE82 1336 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 A0A1W2PQC6 194 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 A8MUI8 341 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 HSPA9P38646 679 aaKnown RBP13.35□□□□□ -0.27
EBF1-201ENST00000313708 HEATR3Q7Z4Q2 680 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 RILPQ96NA2 401 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 LRRC27Q9C0I9 530 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 MYO5CQ9NQX4 1742 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 FMNL1O95466 1100 aaPredicted RBP13.35□□□□□ -0.27
EBF1-201ENST00000313708 CD44P16070 742 aaKnown RBP13.35□□□□□ -0.27
EBF1-201ENST00000313708 KLK7P49862 253 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 IRX4P78413 519 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 GALNT15Q8N3T1 639 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.35□□□□□ -0.278e-7■■■■■ 32.1
EBF1-201ENST00000313708 NOC2LQ9Y3T9 749 aaKnown RBP13.35□□□□□ -0.27
EBF1-201ENST00000313708 PCDHGC5Q9Y5F6 944 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
EBF1-201ENST00000313708 IFIT5Q13325 482 aaKnown RBP13.35□□□□□ -0.27
EBF1-201ENST00000313708 FOXP4Q8IVH2 680 aaPredicted RBP13.35□□□□□ -0.27
EBF1-201ENST00000313708 IWS1Q96ST2 819 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 NDE1Q9NXR1 346 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 ATXN10Q9UBB4 475 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
EBF1-201ENST00000313708 SPDYE5A6NIY4 337 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 TTI1O43156 1089 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 SART1O43290 800 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 BRAFP15056 766 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 GRIN1Q05586 938 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 GRAMD1BQ3KR37 738 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 DNAAF2Q9NVR5 837 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 FBXO2Q9UK22 296 aaPredicted RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 HPSEQ9Y251 543 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 ASAP2O43150 1006 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 HNRNPRO43390 633 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 SPAG7O75391 227 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 PDE5AO76074 875 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 FGFR4P22455 802 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 VPS37BQ9H9H4 285 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 HAO1Q9UJM8 370 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 WDR91A4D1P6 747 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 STAMBPO95630 424 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 H2AFZP0C0S5 128 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 GJA8P48165 433 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 ZNF844Q08AG5 666 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 H2AFVQ71UI9 128 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 NANOGNBQ7Z5D8 188 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 SRRM1Q8IYB3 904 aaKnown RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
EBF1-201ENST00000313708 FAM161BQ96MY7 647 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 TRAPPC9Q96Q05 1148 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 ANLNQ9NQW6 1124 aa13.34□□□□□ -0.27
EBF1-201ENST00000313708 TRAF3IP3Q9Y228 551 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms