RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ACBD3Q9H3P7 528 aa28.01■■■□□ 2.07
HOXB3-201ENST00000311626 BCAS3Q9H6U6 928 aa28.01■■■□□ 2.07
HOXB3-201ENST00000311626 RNASE9P60153 205 aaKnown RBP28■■■□□ 2.07
HOXB3-201ENST00000311626 FAM83BQ5T0W9 1011 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 FNBP4Q8N3X1 1017 aaPredicted RBP28■■■□□ 2.07
HOXB3-201ENST00000311626 GOLGA5Q8TBA6 731 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 RPGRIP1Q96KN7 1286 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 POTEFA5A3E0 1075 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 POTEIP0CG38 1075 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 KCTD19Q17RG1 926 aaPredicted RBP28■■■□□ 2.07
HOXB3-201ENST00000311626 QRICH1Q2TAL8 776 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 ASTE1Q2TB18 679 aaPredicted RBP28■■■□□ 2.07
HOXB3-201ENST00000311626 POTEGQ6S5H5 508 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 POTEEQ6S8J3 1075 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 SND1Q7KZF4 910 aaKnown RBP eCLIP28■■■□□ 2.07
HOXB3-201ENST00000311626 MSL3Q8N5Y2 521 aaKnown RBP28■■■□□ 2.07
HOXB3-201ENST00000311626 PLIN4Q96Q06 1357 aa28■■■□□ 2.07
HOXB3-201ENST00000311626 MED24O75448 989 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 PSMD2Q13200 908 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 LEKR1Q6ZMV7 388 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 P2RX7Q99572 595 aaKnown RBP27.99■■■□□ 2.07
HOXB3-201ENST00000311626 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.99■■■□□ 2.07
HOXB3-201ENST00000311626 PACSIN2Q9UNF0 486 aaPredicted RBP27.99■■■□□ 2.07
HOXB3-201ENST00000311626 AGPSO00116 658 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 LCA5LO95447 670 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 CCDC181Q5TID7 509 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 TLR10Q9BXR5 811 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 PCDHA1Q9Y5I3 950 aa27.99■■■□□ 2.07
HOXB3-201ENST00000311626 FTCDO95954 541 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 KRT18P05783 430 aaKnown RBP27.98■■■□□ 2.07
HOXB3-201ENST00000311626 CASP5P51878 434 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 PSMC6P62333 389 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 MUM1L1Q5H9M0 696 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 ALS2CR12Q96Q35 445 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 ZC3H12CQ9C0D7 883 aaKnown RBP27.98■■■□□ 2.07
HOXB3-201ENST00000311626 MED4Q9NPJ6 270 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 RAPGEF1Q13905 1077 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 PTPROQ16827 1216 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 KLHDC7AQ5VTJ3 777 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 SCFD1Q8WVM8 642 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 PACSIN1Q9BY11 444 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 DNAJC18Q9H819 358 aa27.98■■■□□ 2.07
HOXB3-201ENST00000311626 NHSQ6T4R5 1651 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 PRPF6O94906 941 aaKnown RBP27.97■■■□□ 2.07
HOXB3-201ENST00000311626 ACTN1P12814 892 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 SFMBT2Q5VUG0 894 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 TBC1D5Q92609 795 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 BMP2KQ9NSY1 1161 aaPredicted RBP27.97■■■□□ 2.07
HOXB3-201ENST00000311626 HYOU1Q9Y4L1 999 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 PCDHA2Q9Y5H9 948 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 ADAMTSL1Q8N6G6 1762 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 MCM3P25205 808 aa27.97■■■□□ 2.07
HOXB3-201ENST00000311626 RBM12Q9NTZ6 932 aaKnown RBP27.97■■■□□ 2.07
HOXB3-201ENST00000311626 ATF5Q9Y2D1 282 aaPredicted RBP27.97■■■□□ 2.07
HOXB3-201ENST00000311626 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.97■■■□□ 2.07
HOXB3-201ENST00000311626 FAM170AA1A519 330 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 POLRMTO00411 1230 aaKnown RBP27.96■■■□□ 2.07
HOXB3-201ENST00000311626 CYP11B2P19099 503 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 ARSHQ5FYA8 562 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 SLC30A10Q6XR72 485 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 FAM133AQ8N9E0 248 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 VIPAS39Q9H9C1 493 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 UBAP1LF5GYI3 381 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 AARSP49588 968 aaKnown RBP eCLIP27.96■■■□□ 2.07
HOXB3-201ENST00000311626 APOBEC3HQ6NTF7 200 aaKnown RBP27.96■■■□□ 2.07
HOXB3-201ENST00000311626 MMGT1Q8N4V1 131 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 LRRC27Q9C0I9 530 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 EMILIN3Q9NT22 766 aa27.96■■■□□ 2.07
HOXB3-201ENST00000311626 TRIM66O15016 1216 aa27.95■■■□□ 2.07
HOXB3-201ENST00000311626 EEF2P13639 858 aaKnown RBP27.95■■■□□ 2.07
HOXB3-201ENST00000311626 HOXA10P31260 410 aaPredicted RBP27.95■■■□□ 2.07
HOXB3-201ENST00000311626 USH1GQ495M9 461 aa27.95■■■□□ 2.07
HOXB3-201ENST00000311626 AFAP1L1Q8TED9 768 aa27.95■■■□□ 2.07
HOXB3-201ENST00000311626 ANKRD65E5RJM6 399 aa27.95■■■□□ 2.06
HOXB3-201ENST00000311626 ADAM9Q13443 819 aa27.95■■■□□ 2.06
HOXB3-201ENST00000311626 PRR16Q569H4 304 aa27.95■■■□□ 2.06
HOXB3-201ENST00000311626 LRRC31Q6UY01 552 aa27.95■■■□□ 2.06
HOXB3-201ENST00000311626 CCDC65Q8IXS2 484 aa27.95■■■□□ 2.06
HOXB3-201ENST00000311626 ANO3Q9BYT9 981 aa27.95■■■□□ 2.06
HOXB3-201ENST00000311626 COA1Q9GZY4 146 aa27.95■■■□□ 2.06
HOXB3-201ENST00000311626 PALMO75781 387 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 PABPC4Q13310 644 aaKnown RBP eCLIP27.94■■■□□ 2.06
HOXB3-201ENST00000311626 SLC9C1Q4G0N8 1177 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 IQCEQ6IPM2 695 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 AENQ8WTP8 325 aaKnown RBP27.94■■■□□ 2.06
HOXB3-201ENST00000311626 IQCDQ96DY2 449 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 NOX5Q96PH1 765 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 RABEP2Q9H5N1 569 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 DBNDD1Q9H9R9 158 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 CEP72Q9P209 647 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 ADAMTS1Q9UHI8 967 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 ABCB11O95342 1321 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 ZSCAN5CA6NGD5 496 aaPredicted RBP27.94■■■□□ 2.06
HOXB3-201ENST00000311626 G3V3G9 751 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 KLRC1P26715 233 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 CDC37Q16543 378 aaPredicted RBP27.94■■■□□ 2.06
HOXB3-201ENST00000311626 GPATCH4Q5T3I0 446 aaKnown RBP27.94■■■□□ 2.06
HOXB3-201ENST00000311626 DCAF8Q5TAQ9 597 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 HAUS3Q68CZ6 603 aa27.94■■■□□ 2.06
HOXB3-201ENST00000311626 PROM2Q8N271 834 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms