RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 RPGRIP1Q96KN7 1286 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 TSG101Q99816 390 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 LSM14BQ9BX40 385 aaKnown RBP23.05■■□□□ 1.28
RELA-201ENST00000308639 PSTPIP2Q9H939 334 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 MED4Q9NPJ6 270 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 COL4A3BPQ9Y5P4 624 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 ADAMTSL1Q8N6G6 1762 aa23.05■■□□□ 1.28
RELA-201ENST00000308639 ORC2Q13416 577 aaPredicted RBP23.04■■□□□ 1.28
RELA-201ENST00000308639 SND1Q7KZF4 910 aaKnown RBP eCLIP23.04■■□□□ 1.28
RELA-201ENST00000308639 CERS3Q8IU89 383 aa23.04■■□□□ 1.28
RELA-201ENST00000308639 SLF2Q8IX21 1173 aa23.04■■□□□ 1.28
RELA-201ENST00000308639 FNBP4Q8N3X1 1017 aaPredicted RBP23.04■■□□□ 1.28
RELA-201ENST00000308639 CUL5Q93034 780 aa23.04■■□□□ 1.28
RELA-201ENST00000308639 ACBD3Q9H3P7 528 aa23.04■■□□□ 1.28
RELA-201ENST00000308639 AARSP49588 968 aaKnown RBP eCLIP23.04■■□□□ 1.28
RELA-201ENST00000308639 TBC1D22AQ8WUA7 517 aa23.04■■□□□ 1.28
RELA-201ENST00000308639 TLR10Q9BXR5 811 aa23.04■■□□□ 1.28
RELA-201ENST00000308639 PACSIN2Q9UNF0 486 aaPredicted RBP23.04■■□□□ 1.28
RELA-201ENST00000308639 LCA5LO95447 670 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 PPP4R3AQ6IN85 833 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 BCAS3Q9H6U6 928 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 PLIN4Q96Q06 1357 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 ANKRD65E5RJM6 399 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 hCG_1984214I3L0E3 225 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 FAM83BQ5T0W9 1011 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 ZNF713Q8N859 430 aaPredicted RBP23.03■■□□□ 1.28
RELA-201ENST00000308639 VIPAS39Q9H9C1 493 aa23.03■■□□□ 1.28
RELA-201ENST00000308639 FGFR1OPO95684 399 aaKnown RBP23.02■■□□□ 1.28
RELA-201ENST00000308639 RNASE9P60153 205 aaKnown RBP23.02■■□□□ 1.28
RELA-201ENST00000308639 FKBP3Q00688 224 aaKnown RBP23.02■■□□□ 1.28
RELA-201ENST00000308639 HERC4Q5GLZ8 1057 aaPredicted RBP23.02■■□□□ 1.28
RELA-201ENST00000308639 KLHDC7AQ5VTJ3 777 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 LRRC31Q6UY01 552 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 GPBP1Q86WP2 473 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 PACSIN1Q9BY11 444 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 RBM12Q9NTZ6 932 aaKnown RBP23.02■■□□□ 1.28
RELA-201ENST00000308639 POTEFA5A3E0 1075 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 MEIS1O00470 390 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 ZBTB5O15062 677 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 FTCDO95954 541 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 POTEIP0CG38 1075 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 POTEGQ6S5H5 508 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 POTEEQ6S8J3 1075 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 AFAP1L1Q8TED9 768 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 AENQ8WTP8 325 aaKnown RBP23.02■■□□□ 1.28
RELA-201ENST00000308639 P2RX7Q99572 595 aaKnown RBP23.02■■□□□ 1.28
RELA-201ENST00000308639 HYOU1Q9Y4L1 999 aa23.02■■□□□ 1.28
RELA-201ENST00000308639 ARFGEF1Q9Y6D6 1849 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 PLA2G4BP0C869 781 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 MCM3P25205 808 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 CASP5P51878 434 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 CCDC181Q5TID7 509 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 ALS2CR12Q96Q35 445 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 ZSCAN5CA6NGD5 496 aaPredicted RBP23.01■■□□□ 1.27
RELA-201ENST00000308639 MED24O75448 989 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 TCP10Q12799 353 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 PTPROQ16827 1216 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 MMGT1Q8N4V1 131 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 SCFD1Q8WVM8 642 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 KCNQ5Q9NR82 932 aa23.01■■□□□ 1.27
RELA-201ENST00000308639 BBOX1O75936 387 aa23■■□□□ 1.27
RELA-201ENST00000308639 RAPGEF1Q13905 1077 aa23■■□□□ 1.27
RELA-201ENST00000308639 HAUS3Q68CZ6 603 aa23■■□□□ 1.27
RELA-201ENST00000308639 CDC42EP5Q6NZY7 148 aa23■■□□□ 1.27
RELA-201ENST00000308639 TBC1D5Q92609 795 aa23■■□□□ 1.27
RELA-201ENST00000308639 RABEP2Q9H5N1 569 aa23■■□□□ 1.27
RELA-201ENST00000308639 PCDHA2Q9Y5H9 948 aa23■■□□□ 1.27
RELA-201ENST00000308639 FOCADQ5VW36 1801 aa23■■□□□ 1.27
RELA-201ENST00000308639 ACTN1P12814 892 aa23■■□□□ 1.27
RELA-201ENST00000308639 MRPL12P52815 198 aaKnown RBP23■■□□□ 1.27
RELA-201ENST00000308639 PSMC6P62333 389 aa23■■□□□ 1.27
RELA-201ENST00000308639 PSMD2Q13200 908 aa23■■□□□ 1.27
RELA-201ENST00000308639 QRICH1Q2TAL8 776 aa23■■□□□ 1.27
RELA-201ENST00000308639 FAM133AQ8N9E0 248 aa23■■□□□ 1.27
RELA-201ENST00000308639 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23■■□□□ 1.27
RELA-201ENST00000308639 ESYT3A0FGR9 886 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 SFMBT2Q5VUG0 894 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 C10orf67Q8IYJ2 551 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 TSEN2Q8NCE0 465 aaKnown RBP22.99■■□□□ 1.27
RELA-201ENST00000308639 DNAJC18Q9H819 358 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 FAM170AA1A519 330 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 PALMO75781 387 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 CYP11B2P19099 503 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 KLRC1P26715 233 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 ARSHQ5FYA8 562 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.99■■□□□ 1.27
RELA-201ENST00000308639 ABCB11O95342 1321 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 LY75O60449 1722 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 MYH4Q9Y623 1939 aa22.99■■□□□ 1.27
RELA-201ENST00000308639 A0A087X0T9 212 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 FAM228BP0C875 321 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 IQCEQ6IPM2 695 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 SLC30A10Q6XR72 485 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 EHD4Q9H223 541 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 GOLPH3Q9H4A6 298 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 ADAMTS1Q9UHI8 967 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 FAM184BQ9ULE4 1060 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 ATF5Q9Y2D1 282 aaPredicted RBP22.98■■□□□ 1.27
RELA-201ENST00000308639 PCDHA1Q9Y5I3 950 aa22.98■■□□□ 1.27
RELA-201ENST00000308639 GOLGA6BA6NDN3 693 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms