RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 METTL7BQ6UX53 244 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 EMID1Q96A84 441 aaPredicted RBP27.72■■■□□ 2.03
HOXC9-201ENST00000303450 BCAS3Q9H6U6 928 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 MARCH6O60337 910 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 NEMFO60524 1076 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 NFASCO94856 1347 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 ITGB3BPQ13352 177 aaPredicted RBP27.72■■■□□ 2.03
HOXC9-201ENST00000303450 BRDTQ58F21 947 aaPredicted RBP27.72■■■□□ 2.03
HOXC9-201ENST00000303450 POTEDQ86YR6 584 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 SPATA33Q96N06 139 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 DOCK5Q9H7D0 1870 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 TBC1D22BQ9NU19 505 aa27.72■■■□□ 2.03
HOXC9-201ENST00000303450 FARP2O94887 1054 aaPredicted RBP27.71■■■□□ 2.03
HOXC9-201ENST00000303450 CAPN2P17655 700 aa27.71■■■□□ 2.03
HOXC9-201ENST00000303450 CPT1AP50416 773 aa27.71■■■□□ 2.03
HOXC9-201ENST00000303450 ORC2Q13416 577 aaPredicted RBP27.71■■■□□ 2.03
HOXC9-201ENST00000303450 NBR1Q14596 966 aa27.71■■■□□ 2.03
HOXC9-201ENST00000303450 LRRC41Q15345 812 aa27.71■■■□□ 2.03
HOXC9-201ENST00000303450 FSCN1Q16658 493 aaKnown RBP27.71■■■□□ 2.03
HOXC9-201ENST00000303450 GNASQ5JWF2 1037 aa27.71■■■□□ 2.03
HOXC9-201ENST00000303450 JPH1Q9HDC5 661 aaPredicted RBP27.71■■■□□ 2.03
HOXC9-201ENST00000303450 POTEFA5A3E0 1075 aa27.7■■■□□ 2.02
HOXC9-201ENST00000303450 MYADML2A6NDP7 307 aa27.7■■■□□ 2.02
HOXC9-201ENST00000303450 IRX5P78411 483 aaPredicted RBP27.7■■■□□ 2.02
HOXC9-201ENST00000303450 BEX3Q00994 111 aa27.7■■■□□ 2.02
HOXC9-201ENST00000303450 ETNPPLQ8TBG4 499 aa27.7■■■□□ 2.02
HOXC9-201ENST00000303450 AFG1LQ8WV93 481 aa27.7■■■□□ 2.02
HOXC9-201ENST00000303450 SLC5A5Q92911 643 aa27.7■■■□□ 2.02
HOXC9-201ENST00000303450 PCDHB6Q9Y5E3 794 aa27.7■■■□□ 2.02
HOXC9-201ENST00000303450 NOP56O00567 594 aaKnown RBP27.69■■■□□ 2.02
HOXC9-201ENST00000303450 TBX3O15119 743 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 BAG4O95429 457 aaKnown RBP27.69■■■□□ 2.02
HOXC9-201ENST00000303450 F13A1P00488 732 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 NKX3-2P78367 333 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 SP4Q02446 784 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 CALCRLQ16602 461 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 KLHDC9Q8NEP7 349 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 PPTC7Q8NI37 304 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 FAM20AQ96MK3 541 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 KCNMB3Q9NPA1 279 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 SLC9A2Q9UBY0 812 aa27.69■■■□□ 2.02
HOXC9-201ENST00000303450 A6NJR5 290 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 KBTBD13C9JR72 458 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 DDX39AO00148 427 aaKnown RBP27.68■■■□□ 2.02
HOXC9-201ENST00000303450 CTAGE5O15320 804 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 DHX15O43143 795 aaKnown RBP27.68■■■□□ 2.02
HOXC9-201ENST00000303450 ZEB2O60315 1214 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 GAS7O60861 476 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 CST5P28325 142 aaPredicted RBP27.68■■■□□ 2.02
HOXC9-201ENST00000303450 HSDL1Q3SXM5 330 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 LRCH2Q5VUJ6 765 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 GJA10Q969M2 543 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 RIT2Q99578 217 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 TCEAL9Q9UHQ7 104 aa27.68■■■□□ 2.02
HOXC9-201ENST00000303450 SLFN12Q8IYM2 578 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 PCSK9Q8NBP7 692 aaKnown RBP27.67■■■□□ 2.02
HOXC9-201ENST00000303450 TEKT3Q9BXF9 490 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 DNM1LO00429 736 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 BRD1O95696 1058 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 EN2P19622 333 aaPredicted RBP27.67■■■□□ 2.02
HOXC9-201ENST00000303450 KCNA10Q16322 511 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 FAM173BQ6P4H8 233 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 ANKLE1Q8NAG6 615 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 HAS1Q92839 578 aa27.67■■■□□ 2.02
HOXC9-201ENST00000303450 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.67■■■□□ 2.02
HOXC9-201ENST00000303450 MMP3P08254 477 aa27.66■■■□□ 2.02
HOXC9-201ENST00000303450 SOX10P56693 466 aa27.66■■■□□ 2.02
HOXC9-201ENST00000303450 TMEM60Q9H2L4 133 aa27.66■■■□□ 2.02
HOXC9-201ENST00000303450 KRT76Q01546 638 aa27.65■■■□□ 2.02
HOXC9-201ENST00000303450 DGKDQ16760 1214 aa27.65■■■□□ 2.02
HOXC9-201ENST00000303450 IPO9Q96P70 1041 aaKnown RBP27.65■■■□□ 2.02
HOXC9-201ENST00000303450 GPR20Q99678 358 aa27.65■■■□□ 2.02
HOXC9-201ENST00000303450 TSEN34Q9BSV6 310 aaKnown RBP27.65■■■□□ 2.02
HOXC9-201ENST00000303450 PPFIA4O75335 1185 aa27.64■■■□□ 2.02
HOXC9-201ENST00000303450 PSMD10O75832 226 aa27.64■■■□□ 2.02
HOXC9-201ENST00000303450 DDIT3P35638 169 aa27.64■■■□□ 2.02
HOXC9-201ENST00000303450 NUCB2P80303 420 aa27.64■■■□□ 2.02
HOXC9-201ENST00000303450 PTGDRQ13258 359 aa27.64■■■□□ 2.02
HOXC9-201ENST00000303450 CCSAPQ6IQ19 270 aaPredicted RBP27.64■■■□□ 2.02
HOXC9-201ENST00000303450 MTMR9Q96QG7 549 aa27.64■■■□□ 2.02
HOXC9-201ENST00000303450 ZDHHC9Q9Y397 364 aa27.64■■■□□ 2.02
HOXC9-201ENST00000303450 ASGR1P07306 291 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 MYL3P08590 195 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 OR52Z1P0C646 297 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 ACTR2P61160 394 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 ZNF746Q6NUN9 644 aaPredicted RBP27.63■■■□□ 2.01
HOXC9-201ENST00000303450 SEPT1Q8WYJ6 367 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 POLR3EQ9NVU0 708 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 TELO2Q9Y4R8 837 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 ELP1O95163 1332 aa27.63■■■□□ 2.01
HOXC9-201ENST00000303450 MOXD2PA6NHM9 499 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 KPNA6O60684 536 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 CCNE2O96020 404 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 TXKP42681 527 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 ACLYP53396 1101 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 PCDHA12Q9UN75 941 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 LAD1O00515 517 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 CHMP2AO43633 222 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 SF3A1Q15459 793 aaKnown RBP27.62■■■□□ 2.01
HOXC9-201ENST00000303450 FOXD4L6Q3SYB3 417 aaPredicted RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms