RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 FAM173BQ6P4H8 233 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 USP17L6PQ6QN14 398 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 FOXD4L3Q6VB84 417 aaPredicted RBP7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 TRIM22Q8IYM9 498 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 PRPF38AQ8NAV1 312 aaKnown RBP7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 IL31RAQ8NI17 732 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 CD99L2Q8TCZ2 262 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 UIMC1Q96RL1 719 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 SPOCK3Q9BQ16 436 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 LZTS2Q9BRK4 669 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 ADAMTS5Q9UNA0 930 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 PCDHA1Q9Y5I3 950 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 ASTN1O14525 1302 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 MYPNQ86TC9 1320 aa7.47□□□□□ -1.21
DEPDC4-201ENST00000299185 CCDC196A0A1B0GTZ2 297 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 CA12O43570 354 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 PLA2G6O60733 806 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 CELA2BP08218 269 aaPredicted RBP7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 PTGS1P23219 599 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 CALML3P27482 149 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 STAT3P40763 770 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 ADCY7P51828 1080 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 CNTN2Q02246 1040 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 DHX9Q08211 1270 aaKnown RBP7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 CSPP1Q1MSJ5 1256 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 CPLX2Q6PUV4 134 aaKnown RBP7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 C17orf99Q6UX52 265 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 FCHSD1Q86WN1 690 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 RIOX2Q8IUF8 465 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 FAM184AQ8NB25 1140 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 TSC1Q92574 1164 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 C8orf76Q96K31 380 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 FGD4Q96M96 766 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 TRERF1Q96PN7 1200 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 LLPHQ9BRT6 129 aaKnown RBP7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 AMNQ9BXJ7 453 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 TEX13BQ9BXU2 312 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 FTOQ9C0B1 505 aaKnown RBP eCLIP7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 ZFYVE28Q9HCC9 887 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 A1CFQ9NQ94 594 aaKnown RBP7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 MORF4L1Q9UBU8 362 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 MTMR6Q9Y217 621 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 SLC45A1Q9Y2W3 748 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 RABGAP1Q9Y3P9 1069 aa7.46□□□□□ -1.22
DEPDC4-201ENST00000299185 TLR2O60603 784 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 CFBP00751 764 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 SYT1P21579 422 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 NLRP5P59047 1200 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 HMGN5P82970 282 aaKnown RBP7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 BAATQ14032 418 aaPredicted RBP7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 FAM110CQ1W6H9 321 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 DIS3L2Q8IYB7 885 aaKnown RBP7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 GALNT6Q8NCL4 622 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 GPRC5AQ8NFJ5 357 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 ACAD9Q9H845 621 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 BARHL2Q9NY43 387 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 BIN2Q9UBW5 565 aaPredicted RBP7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 CDV3Q9UKY7 258 aaKnown RBP7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 ZDHHC9Q9Y397 364 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 ABCB11O95342 1321 aa7.45□□□□□ -1.22
DEPDC4-201ENST00000299185 SMCO2A6NFE2 343 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 BTBD18B2RXH4 712 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 RBAK-RBAKDNI3L0D1 243 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 SORBS3O60504 671 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 COBLO75128 1261 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 EIF2AK2P19525 551 aaKnown RBP7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 ATP2B1P20020 1258 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 DDIT3P35638 169 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 MAP2K2P36507 400 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 CTSOP43234 321 aaPredicted RBP7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 GCLCP48506 637 aaPredicted RBP7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 RESTQ13127 1097 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 CCL14Q16627 93 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 GPR142Q7Z601 462 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 NPLOC4Q8TAT6 608 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 SYTL5Q8TDW5 730 aaPredicted RBP7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 TNFRSF25Q93038 417 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 IPO9Q96P70 1041 aaKnown RBP7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 TAAR1Q96RJ0 339 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 MMP19Q99542 508 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 PHF20Q9BVI0 1012 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 ANO3Q9BYT9 981 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 HOXC10Q9NYD6 342 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 GABRQQ9UN88 632 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 MRVI1Q9Y6F6 885 aa7.44□□□□□ -1.22
DEPDC4-201ENST00000299185 ZNF236Q9UL36 1845 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 MGAMO43451 1857 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 H3BQV1 296 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 GPR25O00155 361 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 MEIS2O14770 477 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 TNPO2O14787 897 aaKnown RBP7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 ATP2A1O14983 1001 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 EDIL3O43854 480 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 MMP1P03956 469 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 CYP2B6P20813 491 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 SMARCA1P28370 1054 aa7.43□□□□□ -1.22
DEPDC4-201ENST00000299185 ADORA2AP29274 412 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms