RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 LENG1Q96BZ8 264 aaPredicted RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CSRNP2Q9H175 543 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 DDX41Q9UJV9 622 aaKnown RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 PP2D1A8MPX8 630 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CHMP2AO43633 222 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 PPP6R2O75170 966 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 PSMD10O75832 226 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 TXNP10599 105 aaKnown RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CACNB2Q08289 660 aaPredicted RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 AXDND1Q5T1B0 1012 aaPredicted RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CCDC62Q6P9F0 684 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CYFIP1Q7L576 1253 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 KRI1Q8N9T8 703 aaKnown RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 FAM20AQ96MK3 541 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 SRPRBQ9Y5M8 271 aaKnown RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 POTEMA6NI47 508 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 LAD1O00515 517 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 TBX3O15119 743 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 GAS7O60861 476 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 ARL6IP4Q66PJ3 421 aaKnown RBP17.09■□□□□ 0.33
CCDC140-201ENST00000295226 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 SH3TC2Q8TF17 1288 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 SCFD2Q8WU76 684 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 VAV3Q9UKW4 847 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 PTPN22Q9Y2R2 807 aa17.09■□□□□ 0.33
CCDC140-201ENST00000295226 RBM47A0AV96 593 aaKnown RBP17.08■□□□□ 0.32
CCDC140-201ENST00000295226 EML1O00423 815 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 MAFGO15525 162 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 GGPS1O95749 300 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 SMPD1P17405 629 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 CCND3P30281 292 aaPredicted RBP17.08■□□□□ 0.32
CCDC140-201ENST00000295226 PRPHP41219 470 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 KLHL40Q2TBA0 621 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 CDHR1Q96JP9 859 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 UNC45AQ9H3U1 944 aa17.08■□□□□ 0.32
CCDC140-201ENST00000295226 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 CCNE2O96020 404 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 MYCP01106 439 aaPredicted RBP17.07■□□□□ 0.32
CCDC140-201ENST00000295226 CYBAP13498 195 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 PRKAR2AP13861 404 aaKnown RBP17.07■□□□□ 0.32
CCDC140-201ENST00000295226 CNGA1P29973 690 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 GRK4P32298 578 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 PRMT2P55345 433 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 SPIRE1Q08AE8 756 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 FERMT2Q96AC1 680 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 EPSTI1Q96J88 318 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 TEKT3Q9BXF9 490 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 CUTAO60888 179 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 HMGCRP04035 888 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 TGFB3P10600 412 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC140-201ENST00000295226 IRX5P78411 483 aaPredicted RBP17.07■□□□□ 0.32
CCDC140-201ENST00000295226 TNFAIP2Q03169 654 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 SHC4Q6S5L8 630 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 TRMT44Q8IYL2 757 aaKnown RBP17.07■□□□□ 0.32
CCDC140-201ENST00000295226 PXYLP1Q8TE99 480 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 RIT2Q99578 217 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 TBC1D22BQ9NU19 505 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 LMBRD1Q9NUN5 540 aa17.07■□□□□ 0.32
CCDC140-201ENST00000295226 ELP1O95163 1332 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 FSD2A1L4K1 749 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 INHAP05111 366 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 TMEM266Q2M3C6 531 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 CELF3Q5SZQ8 465 aaKnown RBP17.06■□□□□ 0.32
CCDC140-201ENST00000295226 IQSEC1Q6DN90 963 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 DHX37Q8IY37 1157 aaKnown RBP17.06■□□□□ 0.32
CCDC140-201ENST00000295226 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 SLAIN1Q8ND83 568 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 SENP7Q9BQF6 1050 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 MLXIPQ9HAP2 919 aa17.06■□□□□ 0.32
CCDC140-201ENST00000295226 FARP2O94887 1054 aaPredicted RBP17.05■□□□□ 0.32
CCDC140-201ENST00000295226 NEDD9Q14511 834 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 ZRSR1Q15695 479 aaKnown RBP17.05■□□□□ 0.32
CCDC140-201ENST00000295226 DUSP28Q4G0W2 176 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 ADALQ6DHV7 355 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 B3GNT9Q6UX72 402 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 CTU1Q7Z7A3 348 aaKnown RBP17.05■□□□□ 0.32
CCDC140-201ENST00000295226 IGSF22Q8N9C0 903 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
CCDC140-201ENST00000295226 JPH1Q9HDC5 661 aaPredicted RBP17.05■□□□□ 0.32
CCDC140-201ENST00000295226 SLC9A2Q9UBY0 812 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 LRWD1Q9UFC0 647 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 FAM184BQ9ULE4 1060 aa17.05■□□□□ 0.32
CCDC140-201ENST00000295226 MORC2Q9Y6X9 1032 aaPredicted RBP17.05■□□□□ 0.32
CCDC140-201ENST00000295226 NFASCO94856 1347 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 A0A1B0GVL5 298 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 DYNC1LI2O43237 492 aaPredicted RBP17.04■□□□□ 0.32
CCDC140-201ENST00000295226 ARHGAP1Q07960 439 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 PPP2R5CQ13362 524 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 CSPP1Q1MSJ5 1256 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms