RNA–Protein interactions for RNA: ENST00000278100.10

BCCIP-201, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCCIP, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-201ENST00000278100 TRIP12Q14669 1992 aaPredicted RBP13.25□□□□□ -0.29
BCCIP-201ENST00000278100 SCN10AQ9Y5Y9 1956 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 ABCB11O95342 1321 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 WDR19Q8NEZ3 1342 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 PNMA6FA0A0J9YX94 578 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 POTEB3A0JP26 581 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 DDAH1O94760 285 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 REC8O95072 547 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 LIFRP42702 1097 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 TAP1Q03518 808 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 POTEBQ6S5H4 581 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 TMTC3Q6ZXV5 915 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 TMEM260Q9NX78 707 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 RTEL1Q9NZ71 1219 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
BCCIP-201ENST00000278100 NOD1Q9Y239 953 aa13.25□□□□□ -0.29
BCCIP-201ENST00000278100 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
BCCIP-201ENST00000278100 FAM86C2PA6NEL3 165 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 ZBTB43O43298 467 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 IQCF3P0C7M6 154 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 PDE4DQ08499 809 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 FUT2Q10981 343 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 GRB10Q13322 594 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 RTN1Q16799 776 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 LY6KQ17RY6 165 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 HEATR3Q7Z4Q2 680 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 HERC6Q8IVU3 1022 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 GDPD5Q8WTR4 605 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
BCCIP-201ENST00000278100 XIRP2A4UGR9 3374 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 LCHNA4D1U4 455 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 TLL1O43897 1013 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 BRDTQ58F21 947 aaPredicted RBP13.23□□□□□ -0.29
BCCIP-201ENST00000278100 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 KHSRPQ92945 711 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■■□□□ 11.6
BCCIP-201ENST00000278100 RRP36Q96EU6 259 aaKnown RBP13.23□□□□□ -0.29
BCCIP-201ENST00000278100 LRFN3Q9BTN0 628 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 PKD2L1Q9P0L9 805 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
BCCIP-201ENST00000278100 RBM47A0AV96 593 aaKnown RBP13.22□□□□□ -0.29
BCCIP-201ENST00000278100 KIF28PB7ZC32 967 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 LARGE1O95461 756 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
BCCIP-201ENST00000278100 PDIA3P30101 505 aaKnown RBP13.22□□□□□ -0.29
BCCIP-201ENST00000278100 RFC2P35250 354 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 KCNJ6P48051 423 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 FOSBP53539 338 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 SYNE3Q6ZMZ3 975 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 NECAB1Q8N987 351 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 HLA-CQ95604 372 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 RNF166Q96A37 237 aaPredicted RBP13.22□□□□□ -0.29
BCCIP-201ENST00000278100 AIFM3Q96NN9 605 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 PXMP2Q9NR77 195 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 PDRG1Q9NUG6 133 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 COG5Q9UP83 839 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 HCN4Q9Y3Q4 1203 aa13.22□□□□□ -0.29
BCCIP-201ENST00000278100 GCOM1H8Y6P7 765 aaPredicted RBP13.21□□□□□ -0.29
BCCIP-201ENST00000278100 RGS20O76081 388 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 NR3C2P08235 984 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 POU3F3P20264 500 aaPredicted RBP13.21□□□□□ -0.29
BCCIP-201ENST00000278100 KIF5BP33176 963 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
BCCIP-201ENST00000278100 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.29
BCCIP-201ENST00000278100 HSD17B4P51659 736 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 DEFB103AP81534 67 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 SP2Q02086 613 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 BFSP2Q13515 415 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 KRT32Q14532 448 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 PTGISQ16647 500 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 TMEM31Q5JXX7 168 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 PHOSPHO2Q8TCD6 241 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 RASGRP4Q8TDF6 673 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 SPZ1Q9BXG8 430 aa13.21□□□□□ -0.29
BCCIP-201ENST00000278100 TRANK1O15050 2925 aa13.21□□□□□ -0.3
BCCIP-201ENST00000278100 MEIS2O14770 477 aa13.2□□□□□ -0.3
BCCIP-201ENST00000278100 LPXNO60711 386 aa13.2□□□□□ -0.3
BCCIP-201ENST00000278100 EDNRBP24530 442 aa13.2□□□□□ -0.3
BCCIP-201ENST00000278100 WDR5P61964 334 aaKnown RBP13.2□□□□□ -0.3
BCCIP-201ENST00000278100 PGM5Q15124 567 aa13.2□□□□□ -0.3
BCCIP-201ENST00000278100 PKN1Q16512 942 aa13.2□□□□□ -0.3
BCCIP-201ENST00000278100 GDF6Q6KF10 455 aaPredicted RBP13.2□□□□□ -0.3
BCCIP-201ENST00000278100 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
BCCIP-201ENST00000278100 SCFD2Q8WU76 684 aa13.2□□□□□ -0.3
BCCIP-201ENST00000278100 AFG1LQ8WV93 481 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms