RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ABTB1Q969K4 478 aaPredicted RBP10.06□□□□□ -0.8
PDGFC-201ENST00000274071 UTP4Q969X6 686 aaKnown RBP10.06□□□□□ -0.8
PDGFC-201ENST00000274071 PPP1R14BQ96C90 147 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 IFT74Q96LB3 600 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 DDX23Q9BUQ8 820 aaKnown RBP10.06□□□□□ -0.8
PDGFC-201ENST00000274071 PUS3Q9BZE2 481 aaKnown RBP10.06□□□□□ -0.8
PDGFC-201ENST00000274071 VPS16Q9H269 839 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 CTTNBP2NLQ9P2B4 639 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 R3HDM2Q9Y2K5 976 aaKnown RBP10.06□□□□□ -0.8
PDGFC-201ENST00000274071 TMEM94Q12767 1356 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 ATP9BO43861 1147 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 ETS2P15036 469 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 XBP1P17861 261 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 GM2AP17900 193 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 KCNA3P22001 575 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 HSPA2P54652 639 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 GSTM4Q03013 218 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 TBC1D9BQ66K14 1250 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 MYOCDQ8IZQ8 938 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 TRIML1Q8N9V2 468 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 PPP2R3CQ969Q6 453 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 NR1H4Q96RI1 486 aaPredicted RBP10.06□□□□□ -0.8
PDGFC-201ENST00000274071 FSD1Q9BTV5 496 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 CYP39A1Q9NYL5 469 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 CAPN6Q9Y6Q1 641 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 COMMD3-BMI1R4GMX3 469 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 COL15A1P39059 1388 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 MYH13Q9UKX3 1938 aa10.06□□□□□ -0.8
PDGFC-201ENST00000274071 TJP3O95049 919 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 RGPD2P0DJD1 1756 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 TCP1P17987 556 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 TRIM14Q14142 442 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 RCN2Q14257 317 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 KRT31Q15323 416 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CLPPQ16740 277 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 MUM1Q2TAK8 710 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SLC44A4Q53GD3 710 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ERMNQ8TAM6 284 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 NEK9Q8TD19 979 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 PIGOQ8TEQ8 1089 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 GATA6Q92908 595 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 MS4A14Q96JA4 679 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 MPHOSPH6Q99547 160 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 AGXT2Q9BYV1 514 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 KRT23Q9C075 422 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CNOT10Q9H9A5 744 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 LRCH1Q9Y2L9 728 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 DAAM1Q9Y4D1 1078 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 HTR3EA5X5Y0 456 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SIGLEC16A6NMB1 481 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 MMEP08473 750 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ITGA2BP08514 1039 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CYP27A1Q02318 531 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 MAP7D1Q3KQU3 841 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SCUBE1Q8IWY4 988 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SUPT20HQ8NEM7 779 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 DDX17Q92841 729 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 FERMT2Q96AC1 680 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ZNF333Q96JL9 665 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SRPK1Q96SB4 655 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 LRRC4CQ9HCJ2 640 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 BABAM1Q9NWV8 329 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SERTAD1Q9UHV2 236 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SYNRGQ9UMZ2 1314 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SEMA3EO15041 775 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 P4HA2O15460 535 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CHN1P15882 459 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 HOXD11P31277 338 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CD97P48960 835 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CLCN2P51788 898 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 EXOSC10Q01780 885 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ZNF362Q5T0B9 420 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 OLFML2BQ68BL8 750 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ZNF280DQ6N043 979 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 TMEM53Q6P2H8 277 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ATXN2LQ8WWM7 1075 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 LENG1Q96BZ8 264 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 CLIP3Q96DZ5 547 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ZNF274Q96GC6 653 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 DHTKD1Q96HY7 919 aaPredicted RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ABHD8Q96I13 439 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 NUDCD1Q96RS6 583 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 MAP3K14Q99558 947 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 LGR6Q9HBX8 967 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 PDP2Q9P2J9 529 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 DDX25Q9UHL0 483 aaKnown RBP10.05□□□□□ -0.8
PDGFC-201ENST00000274071 ZNF180Q9UJW8 692 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 SYNPO2Q9UMS6 1093 aa10.05□□□□□ -0.8
PDGFC-201ENST00000274071 LRRC37A3O60309 1634 aa10.04□□□□□ -0.8
PDGFC-201ENST00000274071 PHRF1Q9P1Y6 1649 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms