RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
SLC3A1-201ENST00000260649 MIGA2Q7L4E1 593 aa12.56□□□□□ -0.4
SLC3A1-201ENST00000260649 CATSPER3Q86XQ3 398 aa12.56□□□□□ -0.4
SLC3A1-201ENST00000260649 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
SLC3A1-201ENST00000260649 DCAF4Q8WV16 495 aa12.56□□□□□ -0.4
SLC3A1-201ENST00000260649 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
SLC3A1-201ENST00000260649 LRRC37AA6NMS7 1700 aa12.56□□□□□ -0.4
SLC3A1-201ENST00000260649 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 CYP11B2P19099 503 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 OAS2P29728 719 aaKnown RBP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 PPP1R2P41236 205 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 AMPD2Q01433 879 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 KIF5AQ12840 1032 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 NEK11Q8NG66 645 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 IFIH1Q9BYX4 1025 aaKnown RBP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 RGL1Q9NZL6 768 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 SAR1BQ9Y6B6 198 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 MYO3BQ8WXR4 1341 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 YDJCA8MPS7 323 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 RSPH10B2B2RC85 870 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 RSPH10BP0C881 870 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 BMP3P12645 472 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 GCFC2P16383 781 aaKnown RBP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 CXCR5P32302 372 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 KIF11P52732 1056 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 LRRC63Q05C16 580 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 LSM14BQ9BX40 385 aaKnown RBP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 FUT8Q9BYC5 575 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 PDGFDQ9GZP0 370 aaPredicted RBP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 NT5C3AQ9H0P0 336 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 IKZF4Q9H2S9 585 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 SMARCAL1Q9NZC9 954 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 COL4A3BPQ9Y5P4 624 aa12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 COL11A2P13942 1736 aaPredicted RBP12.55□□□□□ -0.4
SLC3A1-201ENST00000260649 EIF3CLB5ME19 914 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 BUB1O43683 1085 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 FGFR1OPO95684 399 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 POLR2FP61218 127 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 GABPB1Q06547 395 aaPredicted RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 SMC1AQ14683 1233 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 WHAMMP3Q1A5X7 153 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 ARSHQ5FYA8 562 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 TRMT1LQ7Z2T5 733 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 PIGOQ8TEQ8 1089 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 EIF3CQ99613 913 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 IDI2Q9BXS1 227 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 LRRC27Q9C0I9 530 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 EMILIN3Q9NT22 766 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 ZBTB39O15060 712 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 EHHADHQ08426 723 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 TATDN1Q6P1N9 297 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 SCFD1Q8WVM8 642 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 SECISBP2LQ93073 1101 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 MKL1Q969V6 931 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 KCNMB3Q9NPA1 279 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 KDM3AQ9Y4C1 1321 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 SLX4Q8IY92 1834 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 NCK2O43639 380 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 EPS15P42566 896 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 RASSF7Q02833 373 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 ADAM9Q13443 819 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 CTTNQ14247 550 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 TRAPPC11Q7Z392 1133 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 GSPT2Q8IYD1 628 aaKnown RBP12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 PKD2L1Q9P0L9 805 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 PLAGL2Q9UPG8 496 aa12.54□□□□□ -0.4
SLC3A1-201ENST00000260649 PSMD14O00487 310 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 USP11P51784 963 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 VAV2P52735 878 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 PSMD2Q13200 908 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 CCDC170Q8IYT3 715 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 BHMT2Q9H2M3 363 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 PLEKHA4Q9H4M7 779 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 PRR12Q9ULL5 1215 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 CLIC2O15247 247 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 PHACTR2O75167 634 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 C2orf54Q08AI8 447 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 RAPGEF1Q13905 1077 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 REEP2Q9BRK0 252 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 PDE11AQ9HCR9 933 aa12.53□□□□□ -0.4
SLC3A1-201ENST00000260649 DNM3Q9UQ16 869 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms