RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ANO10Q9NW15 660 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 USP25Q9UHP3 1055 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 EN2P19622 333 aaPredicted RBP19.66■□□□□ 0.74
SRSF1-201ENST00000258962 CYP2C19P33261 490 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 TXLNAP40222 546 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 TECP42680 631 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 RGS19P49795 217 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 HSD17B4P51659 736 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 KARSQ15046 597 aaKnown RBP19.66■□□□□ 0.74
SRSF1-201ENST00000258962 ZNF792Q3KQV3 632 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 MAP3K21Q5TCX8 1036 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 KANK3Q6NY19 840 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 PDXDC2PQ6P474 469 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 FCHSD1Q86WN1 690 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 DEFB118Q96PH6 123 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 PCDHA5Q9Y5H7 936 aa19.66■□□□□ 0.74
SRSF1-201ENST00000258962 ZNFX1Q9P2E3 1918 aaKnown RBP19.65■□□□□ 0.74
SRSF1-201ENST00000258962 POTEB2H3BUK9 544 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 BIN1O00499 593 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 NFIBO00712 420 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 NLRP12P59046 1061 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 GHRHRQ02643 423 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 DPCR1Q3MIW9 517 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 MUM1L1Q5H9M0 696 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 NSMFQ6X4W1 530 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 IQUBQ8NA54 791 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 PAGE5Q96GU1 130 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 PYM1Q9BRP8 204 aaKnown RBP19.65■□□□□ 0.74
SRSF1-201ENST00000258962 PAK6Q9NQU5 681 aaPredicted RBP19.65■□□□□ 0.74
SRSF1-201ENST00000258962 DISC1Q9NRI5 854 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 HOOK1Q9UJC3 728 aaKnown RBP19.65■□□□□ 0.74
SRSF1-201ENST00000258962 PFASO15067 1338 aa19.65■□□□□ 0.74
SRSF1-201ENST00000258962 ZNF236Q9UL36 1845 aa19.64■□□□□ 0.74
SRSF1-201ENST00000258962 DNAJC25-GNG10A0A024R161 153 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 SGPL1O95470 568 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 TFRCP02786 760 aaKnown RBP19.64■□□□□ 0.73
SRSF1-201ENST00000258962 CYP3A4P08684 503 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 CIITAP33076 1130 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 UBA7P41226 1012 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 GJA8P48165 433 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 ZNF165P49910 485 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 CABP7Q86V35 215 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 LUZP1Q86V48 1076 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 CEP57L1Q8IYX8 460 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 U2AF1L4Q8WU68 220 aaKnown RBP19.64■□□□□ 0.73
SRSF1-201ENST00000258962 LENG9Q96B70 501 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 MMTAG2Q9BU76 263 aaKnown RBP19.64■□□□□ 0.73
SRSF1-201ENST00000258962 KCNMB3Q9NPA1 279 aa19.64■□□□□ 0.73
SRSF1-201ENST00000258962 A1CFQ9NQ94 594 aaKnown RBP19.64■□□□□ 0.73
SRSF1-201ENST00000258962 CAVIN2O95810 425 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 CAPN2P17655 700 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 CNGA1P29973 690 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 SARSP49591 514 aaKnown RBP19.63■□□□□ 0.73
SRSF1-201ENST00000258962 Q4G0T1 1027 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 NAALADL2Q58DX5 795 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 NT5DC1Q5TFE4 455 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 SPATA20Q8TB22 786 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 LRRC15Q8TF66 581 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 GJA10Q969M2 543 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 MTRQ99707 1265 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 TINF2Q9BSI4 451 aa19.63■□□□□ 0.73
SRSF1-201ENST00000258962 FAM86B1E9PN63 330 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 FAM86B2P0C5J1 330 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 AFMP43652 599 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 IQCB1Q15051 598 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 TMEM266Q2M3C6 531 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 MSL3Q8N5Y2 521 aaKnown RBP19.62■□□□□ 0.73
SRSF1-201ENST00000258962 TTC12Q9H892 705 aaPredicted RBP19.62■□□□□ 0.73
SRSF1-201ENST00000258962 CYP39A1Q9NYL5 469 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 COL20A1Q9P218 1284 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 MAN1B1Q9UKM7 699 aa19.62■□□□□ 0.73
SRSF1-201ENST00000258962 POTEMA6NI47 508 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 IGHA2P01877 340 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 CASP1P29466 404 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 CCND3P30281 292 aaPredicted RBP19.61■□□□□ 0.73
SRSF1-201ENST00000258962 STAT6P42226 847 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 MLLT1Q03111 559 aaPredicted RBP19.61■□□□□ 0.73
SRSF1-201ENST00000258962 PDIA5Q14554 519 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 ISM2Q6H9L7 571 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 ZNF467Q7Z7K2 595 aaPredicted RBP19.61■□□□□ 0.73
SRSF1-201ENST00000258962 ETNPPLQ8TBG4 499 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 CENPFP49454 3210 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 IGLV3-22A0A075B6J6 115 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 CNTN2Q02246 1040 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 DPYDQ12882 1025 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 ZRSR1Q15695 479 aaKnown RBP19.61■□□□□ 0.73
SRSF1-201ENST00000258962 PRR16Q569H4 304 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 RRAGBQ5VZM2 374 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 MCF2L2Q86YR7 1114 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 FAM133AQ8N9E0 248 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 SMARCE1Q969G3 411 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 LRWD1Q9UFC0 647 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 CCDC39Q9UFE4 941 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 NRBP1Q9UHY1 535 aa19.61■□□□□ 0.73
SRSF1-201ENST00000258962 SYNGAP1Q96PV0 1343 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 PLCG1P19174 1290 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 BMP6P22004 513 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 BAATQ14032 418 aaPredicted RBP19.6■□□□□ 0.73
SRSF1-201ENST00000258962 RNF207Q6ZRF8 634 aa19.6■□□□□ 0.73
SRSF1-201ENST00000258962 CYP2W1Q8TAV3 490 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms