RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ALKBH5Q6P6C2 394 aaKnown RBP13.46□□□□□ -0.25
USP30-201ENST00000257548 STAG2Q8N3U4 1231 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 DDX23Q9BUQ8 820 aaKnown RBP13.46□□□□□ -0.25
USP30-201ENST00000257548 AZI2Q9H6S1 392 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 LEMD3Q9Y2U8 911 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 FLOT1O75955 427 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 H2AFZP0C0S5 128 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 CHN1P15882 459 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 H2AFVQ71UI9 128 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 GPCPD1Q9NPB8 672 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 CTTNBP2NLQ9P2B4 639 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.25
USP30-201ENST00000257548 GJA10Q969M2 543 aa13.46□□□□□ -0.26
USP30-201ENST00000257548 DYNLL2Q96FJ2 89 aa13.46□□□□□ -0.26
USP30-201ENST00000257548 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.26
USP30-201ENST00000257548 AMFRQ9UKV5 643 aa13.46□□□□□ -0.26
USP30-201ENST00000257548 BCS1LQ9Y276 419 aa13.46□□□□□ -0.26
USP30-201ENST00000257548 USP17L3A6NCW0 530 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 USP17L4A6NCW7 530 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 PDE8AO60658 829 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 FSBPO95073 299 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
USP30-201ENST00000257548 TMTC3Q6ZXV5 915 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 USP17L1Q7RTZ2 530 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 LMNTD2Q8IXW0 634 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 NKIRAS1Q9NYS0 192 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 DBR1Q9UK59 544 aaKnown RBP13.45□□□□□ -0.26
USP30-201ENST00000257548 GRIN2DO15399 1336 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 ZNF76P36508 570 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 MUM1Q2TAK8 710 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 TRIM9Q9C026 710 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 INTUQ9ULD6 942 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 PLAGL2Q9UPG8 496 aa13.45□□□□□ -0.26
USP30-201ENST00000257548 A0A087X0T9 212 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 CCDC169A6NNP5 214 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 ZNF263O14978 683 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 SPOPO43791 374 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 FAM228BP0C875 321 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 ACTN1P12814 892 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 KCNB1Q14721 858 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 CCDC152Q4G0S7 254 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 GLE1Q53GS7 698 aaKnown RBP13.44□□□□□ -0.26
USP30-201ENST00000257548 FAM26FQ5R3K3 315 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 LONP2Q86WA8 852 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 IRF2BP1Q8IU81 584 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 PRCCQ92733 491 aaPredicted RBP13.44□□□□□ -0.26
USP30-201ENST00000257548 CUL5Q93034 780 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 MTRQ99707 1265 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 SH3GL2Q99962 352 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 KLHL14Q9P2G3 628 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 NFAT5O94916 1531 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 CCDC160A6NGH7 325 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 DNM1LO00429 736 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 LTN1O94822 1766 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 GNA11P29992 359 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 SNX1Q13596 522 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 PPP2R5BQ15173 497 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 PDS5AQ29RF7 1337 aaKnown RBP13.44□□□□□ -0.26
USP30-201ENST00000257548 RNF10Q8N5U6 811 aaKnown RBP13.44□□□□□ -0.26
USP30-201ENST00000257548 TBCKQ8TEA7 893 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 LARP4BQ92615 738 aaKnown RBP13.44□□□□□ -0.26
USP30-201ENST00000257548 TRIM7Q9C029 511 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
USP30-201ENST00000257548 NOC2LQ9Y3T9 749 aaKnown RBP13.44□□□□□ -0.26
USP30-201ENST00000257548 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 DCDC2CA8MYV0 355 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 LRRN2O75325 713 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 GFPT2O94808 682 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 FGFR4P22455 802 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 GLG1Q92896 1179 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 ZMYND12Q9H0C1 365 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 ANKIB1Q9P2G1 1089 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
USP30-201ENST00000257548 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 SUN1O94901 812 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 ITGA4P13612 1032 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 TTI2Q6NXR4 508 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 PDXDC2PQ6P474 469 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 RAB17Q9H0T7 212 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 PCDHA4Q9UN74 947 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 WDR19Q8NEZ3 1342 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 CLIC2O15247 247 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 FKBP3Q00688 224 aaKnown RBP13.43□□□□□ -0.26
USP30-201ENST00000257548 PREPLQ4J6C6 727 aaPredicted RBP13.43□□□□□ -0.26
USP30-201ENST00000257548 ANKRD20A8PQ5CZ79 823 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 KLHDC7AQ5VTJ3 777 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 REXO1Q8N1G1 1221 aaKnown RBP13.43□□□□□ -0.26
USP30-201ENST00000257548 ETNK1Q9HBU6 452 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 FRMPD2Q68DX3 1309 aaPredicted RBP13.43□□□□□ -0.26
USP30-201ENST00000257548 LRRD1A4D1F6 860 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 LGR5O75473 907 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 SERPING1P05155 500 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
USP30-201ENST00000257548 NR2F2P24468 414 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms