RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CCDC93Q567U6 631 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 ZBTB41Q5SVQ8 909 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 DNAAF3Q8N9W5 541 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.051e-6■■■□□ 18.3
TGFBR3-201ENST00000212355 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 SSH2Q76I76 1423 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 RASIP1Q5U651 963 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 CCDC197Q8NCU1 140 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 SH3RF3Q8TEJ3 882 aaPredicted RBP14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 PPWD1Q96BP3 646 aaKnown RBP14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 HOOK2Q96ED9 719 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 NT5C1BQ96P26 610 aa14.76□□□□□ -0.05
TGFBR3-201ENST00000212355 PI4K2BG5E9Z4 385 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 PPFIA2O75334 1257 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 ATP2B4P23634 1241 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 LCA5Q86VQ0 697 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 FOXP1Q9H334 677 aaPredicted RBP14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 TTLL1O95922 423 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 TMEM259Q4ZIN3 620 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 PALM3A6NDB9 673 aaPredicted RBP14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 ADPGKQ9BRR6 497 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 CDC25BP30305 580 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 HLFQ16534 295 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 GPR162Q16538 588 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 FAM196AQ6ZSG2 479 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 RETREG2Q8NC44 543 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 KCNV2Q8TDN2 545 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 LRGUKQ96M69 825 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 FAM135BQ49AJ0 1406 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 POTEMA6NI47 508 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 EIF2AK2P19525 551 aaKnown RBP14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 DMTNQ08495 405 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 SLC38A10Q9HBR0 1119 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 GINM1Q9NU53 330 aa14.75□□□□□ -0.05
TGFBR3-201ENST00000212355 TLR3O15455 904 aaKnown RBP14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 CPP00450 1065 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 ABTB1Q969K4 478 aaPredicted RBP14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 SLC4A7Q9Y6M7 1214 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 PP2D1A8MPX8 630 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 SART1O43290 800 aaKnown RBP14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 PLA2G4BP0C869 781 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 KRT31Q15323 416 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 TRIML1Q8N9V2 468 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 KIF11P52732 1056 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 YWHAEP62258 255 aaKnown RBP14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 ZNF211Q13398 564 aaPredicted RBP14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 OLA1Q9NTK5 396 aaKnown RBP14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 PIK3R2O00459 728 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 FOXN1O15353 648 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 PLCB4Q15147 1175 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 NLRP4Q96MN2 994 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 ESYT3A0FGR9 886 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 LMNB1P20700 586 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 OR6B2Q6IFH4 312 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 AS3MTQ9HBK9 375 aa14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 TYW1Q9NV66 732 aaKnown RBP14.74□□□□□ -0.05
TGFBR3-201ENST00000212355 NDUFA10O95299 355 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 PTPN12Q05209 780 aaKnown RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 RASGRF1Q13972 1273 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 TBC1D10CQ8IV04 446 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 SLC44A5Q8NCS7 719 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 DEPDC1BQ8WUY9 529 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 RABGGTAQ92696 567 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 RPGRIP1Q96KN7 1286 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 EMILIN3Q9NT22 766 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 METP08581 1390 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 H0Y3Z8 333 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 PALMO75781 387 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 EPHA10Q5JZY3 1008 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 RNF217Q8TC41 542 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 HEXIM2Q96MH2 286 aaKnown RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 POLR3EQ9NVU0 708 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 LARSQ9P2J5 1176 aaKnown RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 ADAMTS1Q9UHI8 967 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 TTC7AQ9ULT0 858 aaPredicted RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 PLXNC1O60486 1568 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 CHGBP05060 677 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 MCAMP43121 646 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 MSH2P43246 934 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 DPP9Q86TI2 863 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 ANKRD36BP1Q96IX9 119 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 TSPOAP1O95153 1857 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 STAT3P40763 770 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 ANO4Q32M45 955 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 VSTM4Q8IW00 320 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 PARD3BQ8TEW8 1205 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 ATP6V1E2Q96A05 226 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 ECEL1O95672 775 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 IL9RQ01113 521 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 ASPHQ12797 758 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 UBE3CQ15386 1083 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 TRMT10CQ7L0Y3 403 aaKnown RBP14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 GGT7Q9UJ14 662 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 LRRD1A4D1F6 860 aa14.73□□□□□ -0.05
TGFBR3-201ENST00000212355 USP17L5A8MUK1 530 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms