RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 YWHAGP61981 247 aaKnown RBP eCLIP20.49■□□□□ 0.87
MBD3-201ENST00000156825 MIS18BP1Q6P0N0 1132 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 DCLK2Q8N568 766 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 CEP95Q96GE4 821 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 LMNB1P20700 586 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 STAG1Q8WVM7 1258 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 ADAMTS1Q9UHI8 967 aa20.49■□□□□ 0.87
MBD3-201ENST00000156825 CFAP74Q9C0B2 1584 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 C2orf54Q08AI8 447 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 SRGAP1Q7Z6B7 1085 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 FOXP4Q8IVH2 680 aaPredicted RBP20.48■□□□□ 0.87
MBD3-201ENST00000156825 NLRP7Q8WX94 980 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 RWDD2AQ9UIY3 292 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 RNF40O75150 1001 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 PEX3P56589 373 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 ZSCAN26Q16670 478 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 CYP4F22Q6NT55 531 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 RSRC2Q7L4I2 434 aaKnown RBP20.48■□□□□ 0.87
MBD3-201ENST00000156825 GRK7Q8WTQ7 553 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 TACO1Q9BSH4 297 aaKnown RBP20.48■□□□□ 0.87
MBD3-201ENST00000156825 TMEM260Q9NX78 707 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 SGK1O00141 431 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 MXI1P50539 228 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 BCAS4Q8TDM0 211 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 NDST4Q9H3R1 872 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 CD2APQ9Y5K6 639 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 USP17L10C9JJH3 530 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 PLTPP55058 493 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 SMAP1Q8IYB5 467 aaPredicted RBP20.48■□□□□ 0.87
MBD3-201ENST00000156825 P3H4Q92791 437 aa20.48■□□□□ 0.87
MBD3-201ENST00000156825 ABCC3O15438 1527 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 KRT31Q15323 416 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 RFX6Q8HWS3 928 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 PNMA2Q9UL42 364 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 TACC3Q9Y6A5 838 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 COL15A1P39059 1388 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 GABPB1Q06547 395 aaPredicted RBP20.47■□□□□ 0.87
MBD3-201ENST00000156825 TRIP13Q15645 432 aaPredicted RBP20.47■□□□□ 0.87
MBD3-201ENST00000156825 NHEJ1Q9H9Q4 299 aaPredicted RBP20.47■□□□□ 0.87
MBD3-201ENST00000156825 HEXIM1O94992 359 aaKnown RBP20.47■□□□□ 0.87
MBD3-201ENST00000156825 CCND2P30279 289 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 FAM49AQ9H0Q0 323 aaPredicted RBP20.47■□□□□ 0.87
MBD3-201ENST00000156825 ANKRD36BP1Q96IX9 119 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 HOMER3Q9NSC5 361 aa20.47■□□□□ 0.87
MBD3-201ENST00000156825 SARNPP82979 210 aaKnown RBP20.46■□□□□ 0.87
MBD3-201ENST00000156825 NXNQ6DKJ4 435 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 VSTM4Q8IW00 320 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 RSRC1Q96IZ7 334 aaKnown RBP20.46■□□□□ 0.87
MBD3-201ENST00000156825 A6NJR5 290 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 TXNDC9O14530 226 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 TMEM179Q6ZVK1 233 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 RAVER2Q9HCJ3 691 aaKnown RBP20.46■□□□□ 0.87
MBD3-201ENST00000156825 BZW2Q9Y6E2 419 aaKnown RBP20.46■□□□□ 0.87
MBD3-201ENST00000156825 AFF2P51816 1311 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 PP2D1A8MPX8 630 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 ARPP19P56211 112 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 ZNF394Q53GI3 561 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 ZNF668Q96K58 619 aaPredicted RBP20.46■□□□□ 0.87
MBD3-201ENST00000156825 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
MBD3-201ENST00000156825 BPIFB4P59827 614 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 HECW2Q9P2P5 1572 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 LPXNO60711 386 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 AP5M1Q9H0R1 490 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 ATP8A1Q9Y2Q0 1164 aa20.46■□□□□ 0.87
MBD3-201ENST00000156825 RETREG2Q8NC44 543 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 CCNYQ8ND76 341 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 CALN1Q9BXU9 219 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 SMYD2Q9NRG4 433 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
MBD3-201ENST00000156825 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 OATP04181 439 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 OSBPP22059 807 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 THNSL1Q8IYQ7 743 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 GOLPH3LQ9H4A5 285 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 E9PMD0 336 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 ABI1Q8IZP0 508 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 SCYL1Q96KG9 808 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 FNDC3AQ9Y2H6 1198 aaKnown RBP20.45■□□□□ 0.86
MBD3-201ENST00000156825 CPDO75976 1380 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 PHBP35232 272 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 RNF207Q6ZRF8 634 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 BANK1Q8NDB2 785 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 NBPF3Q9H094 633 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 PCDHA6Q9UN73 950 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 PCDHA8Q9Y5H6 950 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 ZHX2Q9Y6X8 837 aa20.45■□□□□ 0.86
MBD3-201ENST00000156825 PPFIA4O75335 1185 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 ASNSP08243 561 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 AFAP1L2Q8N4X5 818 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 LY9Q9HBG7 655 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 MKRN1Q9UHC7 482 aaKnown RBP20.44■□□□□ 0.86
MBD3-201ENST00000156825 A6NNZ2 444 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 NDUFA10O95299 355 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 PTPREP23469 700 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 SLCO1A2P46721 670 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 SLC7A5Q01650 507 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 TUBB8Q3ZCM7 444 aa20.44■□□□□ 0.86
MBD3-201ENST00000156825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.44■□□□□ 0.86
MBD3-201ENST00000156825 CAPS2Q9BXY5 557 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms