RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 NTRK3Q16288 839 aa28.54■■■□□ 2.16
TSR3-201ENST00000007390 CCDC155Q8N6L0 562 aa28.54■■■□□ 2.16
TSR3-201ENST00000007390 CAGE1Q8TC20 777 aa28.54■■■□□ 2.16
TSR3-201ENST00000007390 GPR20Q99678 358 aa28.54■■■□□ 2.16
TSR3-201ENST00000007390 ESYT2A0FGR8 921 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 MAFGO15525 162 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 KCNA2P16389 499 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 RFC2P35250 354 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 CLK2P49760 499 aaKnown RBP28.53■■■□□ 2.16
TSR3-201ENST00000007390 RBL2Q08999 1139 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 MTMR1Q13613 665 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 ZNF697Q5TEC3 545 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 RETREG2Q8NC44 543 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 MTIF3Q9H2K0 278 aaKnown RBP28.53■■■□□ 2.16
TSR3-201ENST00000007390 JADE2Q9NQC1 790 aa28.53■■■□□ 2.16
TSR3-201ENST00000007390 H3BRB1 525 aa28.52■■■□□ 2.16
TSR3-201ENST00000007390 IFNAR1P17181 557 aa28.52■■■□□ 2.16
TSR3-201ENST00000007390 PKN1Q16512 942 aa28.52■■■□□ 2.16
TSR3-201ENST00000007390 RNF26Q9BY78 433 aaPredicted RBP28.52■■■□□ 2.16
TSR3-201ENST00000007390 ANO3Q9BYT9 981 aa28.52■■■□□ 2.16
TSR3-201ENST00000007390 UPF3BQ9BZI7 483 aaKnown RBP28.52■■■□□ 2.16
TSR3-201ENST00000007390 TUT1Q9H6E5 874 aaKnown RBP28.52■■■□□ 2.16
TSR3-201ENST00000007390 TANC1Q9C0D5 1861 aa28.51■■■□□ 2.15
TSR3-201ENST00000007390 TMEM265A0A087WTH1 108 aa28.51■■■□□ 2.15
TSR3-201ENST00000007390 IQCF3P0C7M6 154 aa28.51■■■□□ 2.15
TSR3-201ENST00000007390 AFAP1L1Q8TED9 768 aa28.51■■■□□ 2.15
TSR3-201ENST00000007390 CCDC12Q8WUD4 166 aaPredicted RBP28.51■■■□□ 2.15
TSR3-201ENST00000007390 DHX38Q92620 1227 aaKnown RBP28.51■■■□□ 2.15
TSR3-201ENST00000007390 PHKBQ93100 1093 aa28.51■■■□□ 2.15
TSR3-201ENST00000007390 COL6A3P12111 3177 aa28.51■■■□□ 2.15
TSR3-201ENST00000007390 ATP9AO75110 1047 aa28.5■■■□□ 2.15
TSR3-201ENST00000007390 HOXC8P31273 242 aa28.5■■■□□ 2.15
TSR3-201ENST00000007390 SREBF1P36956 1147 aa28.5■■■□□ 2.15
TSR3-201ENST00000007390 PTK7Q13308 1070 aa28.5■■■□□ 2.15
TSR3-201ENST00000007390 ZNF274Q96GC6 653 aaPredicted RBP28.5■■■□□ 2.15
TSR3-201ENST00000007390 MXRA8Q9BRK3 442 aa28.5■■■□□ 2.15
TSR3-201ENST00000007390 ZMYND12Q9H0C1 365 aa28.5■■■□□ 2.15
TSR3-201ENST00000007390 CXXC1Q9P0U4 656 aaPredicted RBP28.5■■■□□ 2.15
TSR3-201ENST00000007390 AKAP17AQ02040 695 aaKnown RBP28.49■■■□□ 2.15
TSR3-201ENST00000007390 MCTP2Q6DN12 878 aa28.49■■■□□ 2.15
TSR3-201ENST00000007390 PGBD1Q96JS3 809 aa28.49■■■□□ 2.15
TSR3-201ENST00000007390 NCOA5Q9HCD5 579 aaKnown RBP28.49■■■□□ 2.15
TSR3-201ENST00000007390 ANAPC15P60006 121 aa28.48■■■□□ 2.15
TSR3-201ENST00000007390 CCT2P78371 535 aaKnown RBP28.48■■■□□ 2.15
TSR3-201ENST00000007390 OTOP2Q7RTS6 562 aa28.48■■■□□ 2.15
TSR3-201ENST00000007390 C6orf50Q9HD87 102 aa28.48■■■□□ 2.15
TSR3-201ENST00000007390 TMEM260Q9NX78 707 aa28.48■■■□□ 2.15
TSR3-201ENST00000007390 ZNF215Q9UL58 517 aaPredicted RBP28.48■■■□□ 2.15
TSR3-201ENST00000007390 STXBP5LQ9Y2K9 1186 aa28.48■■■□□ 2.15
TSR3-201ENST00000007390 TELO2Q9Y4R8 837 aa28.48■■■□□ 2.15
TSR3-201ENST00000007390 DOCK5Q9H7D0 1870 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 SELPP16109 830 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 DNAJB2P25686 324 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 HIC1Q14526 733 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 TRIM71Q2Q1W2 868 aaKnown RBP28.47■■■□□ 2.15
TSR3-201ENST00000007390 CEP55Q53EZ4 464 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 GUCD1Q96NT3 240 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 SLC26A6Q9BXS9 759 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 SEMA6BQ9H3T3 888 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 KCNH7Q9NS40 1196 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 PDRG1Q9NUG6 133 aa28.47■■■□□ 2.15
TSR3-201ENST00000007390 EIF5BO60841 1220 aaKnown RBP28.46■■■□□ 2.15
TSR3-201ENST00000007390 PARNO95453 639 aaKnown RBP28.46■■■□□ 2.15
TSR3-201ENST00000007390 SMIM10L2AP0DMW4 78 aa28.46■■■□□ 2.15
TSR3-201ENST00000007390 SMIM10L2BP0DMW5 78 aa28.46■■■□□ 2.15
TSR3-201ENST00000007390 ARHGAP4P98171 946 aa28.46■■■□□ 2.15
TSR3-201ENST00000007390 SP4Q02446 784 aa28.46■■■□□ 2.15
TSR3-201ENST00000007390 DEFB128Q7Z7B8 93 aa28.46■■■□□ 2.15
TSR3-201ENST00000007390 SERINC5Q86VE9 423 aa28.46■■■□□ 2.15
TSR3-201ENST00000007390 TRIM50Q86XT4 487 aa28.46■■■□□ 2.15
TSR3-201ENST00000007390 TTYH1Q9H313 450 aaPredicted RBP28.46■■■□□ 2.15
TSR3-201ENST00000007390 C17orf102A2RUQ5 167 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 CKBP12277 381 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 GNA11P29992 359 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 TCF7P36402 384 aaPredicted RBP28.45■■■□□ 2.14
TSR3-201ENST00000007390 ZNF200P98182 395 aaPredicted RBP28.45■■■□□ 2.14
TSR3-201ENST00000007390 LRRC8DQ7L1W4 858 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 REXO1Q8N1G1 1221 aaKnown RBP28.45■■■□□ 2.14
TSR3-201ENST00000007390 CCDC148Q8NFR7 591 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 CYP2W1Q8TAV3 490 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 CRYGNQ8WXF5 182 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 SEPT1Q8WYJ6 367 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 IL17RAQ96F46 866 aa28.45■■■□□ 2.14
TSR3-201ENST00000007390 SCN5AQ14524 2016 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 CHD9Q3L8U1 2897 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 MEIS1O00470 390 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 ACTN1P12814 892 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 UTP14CQ5TAP6 766 aaKnown RBP28.44■■■□□ 2.14
TSR3-201ENST00000007390 JAKMIP3Q5VZ66 844 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 NIPA1Q7RTP0 329 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 TRIM22Q8IYM9 498 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 FAM161BQ96MY7 647 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 PBX4Q9BYU1 374 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 PKD2L1Q9P0L9 805 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 SLC4A7Q9Y6M7 1214 aa28.44■■■□□ 2.14
TSR3-201ENST00000007390 NFASCO94856 1347 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 GSTTP1A0A1W2PQM5 241 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 GRXCR1A8MXD5 290 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 CYP3A4P08684 503 aa28.43■■■□□ 2.14
TSR3-201ENST00000007390 BICD2Q8TD16 824 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms