RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Znf652Q5DU09 608 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Hspa4Q61316 841 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cracr2bQ80ZJ8 394 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ago4Q8CJF8 861 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Gprc5cQ8K3J9 440 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rpap2Q8VC34 614 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tmem79Q9D709 391 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ppil2Q9D787 521 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nol7Q9D7Z3 254 aaKnown RBP10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Fam217aQ9D9W6 419 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Col2a1P28481 1487 aa10.55□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Idh1O88844 414 aaKnown RBP10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Thrap3Q569Z6 951 aaKnown RBP10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Scaf8Q6DID3 1268 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Igdcc3Q8BQC3 813 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Spata4Q8K3V1 295 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Extl2Q9ES89 330 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Vav3Q9R0C8 847 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Vmn2r78K7N6U5 853 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Kcnd1Q03719 651 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Gm5169Q5M8P2 212 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Dync1li2Q6PDL0 492 aaKnown RBP10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Luc7lQ9CYI4 371 aaKnown RBP10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tpp1O89023 562 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tal1P22091 329 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Hoxa11P31311 313 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Brd9Q3UQU0 596 aaKnown RBP10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Zfp251Q6PCX8 632 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Vgll2Q8BGW8 322 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 MslnlQ8C160 685 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Calhm4Q8CE93 315 aa10.54□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Otud7bB2RUR8 840 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Trappc11B2RXC1 1133 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Zfand4D3Z3C6 739 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cyp2c68K7N6C2 491 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ube3aO08759 870 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Dhx37Q6NZL1 1150 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Naa35Q6PHQ8 725 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Spag5Q7TME2 1165 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Klhl20Q8VCK5 604 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nrxn2E9Q7X7 1710 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Msh3P13705 1091 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Nr2f2P43135 414 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 MaeaQ4VC33 396 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pank4Q80YV4 820 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ndfip2Q91ZP6 311 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Olr1Q9EQ09 363 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rgs17Q9QZB0 210 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Eya4Q9Z191 616 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Col1a1P11087 1453 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Cnbd1B1AWM0 430 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Gm15448F6PZL4 682 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Prl2c3P04768 224 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ano9P86044 747 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pstpip1P97814 415 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Dcaf17Q3TUL7 519 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Def6Q8C2K1 630 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Atp1a1Q8VDN2 1023 aaKnown RBP10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tor1aip1Q921T2 595 aaKnown RBP10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 B3galt4Q9Z0F0 371 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 XdhQ00519 1335 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 1700017N19RikA0A087WPJ1 469 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 1700018F24RikB2RW27 314 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 P4hbP09103 509 aaKnown RBP10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 AgtP11859 477 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Fgl2P12804 432 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Gna14P30677 355 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Eepd1Q3TGW2 569 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Q3UJP5 209 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ccdc42Q5SV66 316 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 RragaQ80X95 313 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Hirip3Q8BLH7 601 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Prpf6Q91YR7 941 aaKnown RBP10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 MicalclQ9D5U9 680 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Tbx18Q9EPZ6 613 aa10.53□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Gm3095E9Q058 166 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Pbx1P41778 430 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Akr1b1P45376 316 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Psmc6P62334 389 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rasip1Q3U0S6 961 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Ttll12Q3UDE2 639 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Asic3Q6X1Y6 530 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Slc13a4Q8BZ82 625 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 HyiQ8R1F5 277 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Slc12a8Q8VI23 705 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Galnt15Q9D2N8 638 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Rwdd2aQ9D9S3 292 aa10.52□□□□□ -0.72
Sh3rf1-202ENSMUST00000209611 Senp1P59110 640 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Epha7Q61772 998 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Shtn1Q8K2Q9 631 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Stard7Q8R1R3 373 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Rnaseh2aQ9CWY8 301 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Tsc2Q61037 1814 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Scn9aQ62205 1984 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Etnk2A7MCT6 385 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Nova2D3YVV7 556 aaKnown RBP10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Lrrc55Q3UY51 311 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Ankrd24Q80VM7 985 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Spice1Q8C804 860 aa10.52□□□□□ -0.73
Sh3rf1-202ENSMUST00000209611 Nxf1Q99JX7 618 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms