RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Phrf1A6H619 1682 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Arfgef1G3X9K3 1846 aaKnown RBP11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tbc1d2bQ3U0J8 965 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Arhgap44Q5SSM3 814 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Rap1gap2Q5SVL6 712 aaKnown RBP11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Q8BWG4 1187 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Mmgt1Q8K273 131 aaKnown RBP11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ushbp1Q8R370 680 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Trub2Q91WG3 331 aaKnown RBP11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 VillQ91YD6 859 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Msantd4Q91YU3 345 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ebag9Q9D0V7 213 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Mad2l2Q9D752 211 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Arpc5lQ9D898 153 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 AllcQ9JHX6 414 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Cyp2ab1S4R196 498 aa11.83□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Nr1i2O54915 431 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tagap1P0CAX8 505 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Nr1d1Q3UV55 615 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Cyp2c67Q569X9 491 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tlr11Q6R5P0 926 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Mindy1Q76LS9 468 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Cracr2bQ80ZJ8 394 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Asic2Q925H0 512 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tsnaxip1Q99P25 704 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Nxnl2Q9D531 156 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 2310002L09RikQ9D7L5 217 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Pkd2l2Q9JLG4 621 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 GnaqP21279 359 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 SarsP26638 512 aaKnown RBP11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tmod1P49813 359 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Armc2Q3URY6 854 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Kctd16Q5DTY9 427 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Mapk6Q61532 720 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Sh3gl2Q62420 352 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Cnnm4Q69ZF7 771 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tsga10Q6NY15 697 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 LRWD1Q8BUI3 648 aaKnown RBP11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Znf428Q8C1M2 176 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Trim9Q8C7M3 817 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Spata2Q8K004 515 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Znf24Q91VN1 368 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 March8Q9DBD2 286 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ndst4Q9EQW8 872 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Myoz2Q9JJW5 264 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Gkap1Q9JMB0 366 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Clip2Q9Z0H8 1047 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Nup188Q6ZQH8 1759 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ano3A2AHL1 981 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 AgtP11859 477 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Kcna1P16388 495 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Man1a2P39098 641 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Hsd17b1P51656 344 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Pdrg1P59048 133 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Nlrp2Q4PLS0 1046 aaKnown RBP11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ddx3xQ62167 662 aaKnown RBP11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Fkbp3Q62446 224 aaKnown RBP11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Best3Q6H1V1 669 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ankrd24Q80VM7 985 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Myl6bQ8CI43 207 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Plagl2Q925T4 496 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Dhx58Q99J87 678 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Abcf2Q99LE6 628 aaKnown RBP11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Golph3Q9CRA5 298 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Gtf2iQ9ESZ8 998 aaKnown RBP11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ecm29Q6PDI5 1840 aa11.82□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Dock5B2RY04 1868 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tex13c2A0A0G2JGA3 530 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Gm3893E9Q1I1 302 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Clcn6O35454 870 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Men1O88559 611 aaKnown RBP11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tcp1P11983 556 aaKnown RBP11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Lmnb1P14733 588 aaKnown RBP11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Aco1P28271 889 aaKnown RBP11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Esyt2Q3TZZ7 845 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Spg7Q3ULF4 781 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 PrimpolQ6P1E7 537 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Fnbp1Q80TY0 616 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Cplx4Q80WM3 160 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Gm9758Q80ZT2 255 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Fbxo18Q8K2I9 1042 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Znf622Q91VY9 476 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Gps2Q921N8 327 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ubxn6Q99PL6 442 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Znf827Q505G8 1078 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Zbed4Q80WQ9 1168 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Hirip3Q8BLH7 601 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Als2cr12Q8BVM7 383 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Spats2Q8K1N4 545 aaKnown RBP11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Lgi2Q8K4Z0 550 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 WaslQ91YD9 501 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ube2sQ921J4 223 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Alg1Q921Q3 482 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Tmem192Q9CXT7 266 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Snrnp35Q9D384 244 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Ccdc105Q9D4K7 499 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Smco2Q9DA21 347 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Cd274Q9EP73 290 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Arl6ip4Q9JM93 229 aa11.81□□□□□ -0.52
Prpf40b-202ENSMUST00000118287 Znf667Q2TL60 609 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms