RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Adgra1Q8C4G9 578 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Nop14Q8R3N1 860 aaKnown RBP23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Pcdha12Q91Y18 950 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 PccaQ91ZA3 724 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Xpo4Q9ESJ0 1151 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Zgrf1Q0VGT4 1863 aa23.6■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 4932429P05RikA2ADI4 785 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Cpb1B2RS76 415 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Dhx15O35286 795 aaKnown RBP23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Morf4l1P60762 362 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Psmc6P62334 389 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 VwdeQ6DFV8 926 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Dennd2aQ8C4S8 1000 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 NelfbQ8C4Y3 580 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Mrvi1Q9WUX5 899 aaKnown RBP23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 MtrA6H5Y3 1253 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 OgdhlE9Q7L0 1029 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Lig1P37913 916 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Acsl1P41216 699 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Acot10Q32MW3 439 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Trim47Q8C0E3 641 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Ccdc113Q8C5T8 377 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Ints4Q8CIM8 964 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 MsraQ9D6Y7 233 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Rbp7Q9EPC5 134 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Tacc2Q9JJG0 1149 aa23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Smchd1Q6P5D8 2007 aaKnown RBP23.59■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gm4307E9PZY4 289 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gm4312K9J7E2 289 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Serpina1aP07758 413 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Serpina1bP22599 413 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Serpina1cQ00896 412 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Serpina1dQ00897 413 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Nsun7Q14AW5 724 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Foxn3Q499D0 457 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Ift88Q61371 824 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Rexo1Q7TT28 1213 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Tbc1d10cQ8C9V1 444 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Nek9Q8K1R7 984 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Dqx1Q924H9 718 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 MymkQ9D1N4 221 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Cfap45Q9D9U9 551 aa23.58■■□□□ 1.37
Ccdc88a-202ENSMUST00000109477 Gm7168A0AUV4 508 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Adssl1P28650 457 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Anp32cQ64G17 123 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Ubap2lQ80X50 1107 aaKnown RBP23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Hsdl1Q8BTX9 330 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Setdb2Q8C267 713 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 HyiQ8R1F5 277 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Dph6Q9CQ28 267 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 AacsQ9D2R0 672 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 PycardQ9EPB4 193 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Cabp5Q9JLK3 173 aa23.57■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Krt36B1AQ75 473 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Itgb7P26011 806 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Bach2P97303 839 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Lmntd2Q0VET5 664 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Krt39Q6IFX4 482 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Kdm1aQ6ZQ88 853 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Zdhhc15Q8BGJ0 337 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Ercc6lQ8BHK9 1240 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Ccdc105Q9D4K7 499 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Znhit2Q9QY66 399 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Eya4Q9Z191 616 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Ddx23D3Z0M9 819 aaKnown RBP23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Arhgap6O54834 987 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 MyocO70624 490 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Zkscan4Q5SZT6 480 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Krt9Q6RHW0 743 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Psmd2Q8VDM4 908 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Haus2Q9CQS9 234 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Mipol1Q9D9F8 279 aa23.56■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Apol10bG3X9K7 334 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 TazI7HJS2 263 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Atp9aO70228 1047 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Hvcn1Q3U2S8 269 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 P4ha1Q60715 534 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Mns1Q61884 491 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Asnsd1Q8BFS9 627 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Dhx32Q8BZS9 744 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Fam161bQ8CB59 589 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Mfap3Q922T2 349 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Rhobtb3Q9CTN4 611 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Serpinb12Q9D7P9 423 aa23.55■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Trappc11B2RXC1 1133 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 SpibO35906 267 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Man1a2P39098 641 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Sox10Q04888 466 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Oxsr1Q6P9R2 527 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Raver2Q7TPD6 673 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Rusc1Q8BG26 893 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Taf6lQ8R2K4 616 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Tor1aip1Q921T2 595 aaKnown RBP23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Thap2Q9D305 217 aa23.54■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 AunipE9Q6Z5 340 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Kcna2P63141 499 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Adam6bQ6IMH7 756 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 RnpepQ8VCT3 650 aaKnown RBP23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Cntn6Q9JMB8 1028 aa23.53■■□□□ 1.36
Ccdc88a-202ENSMUST00000109477 Fam205aA2APU8 1308 aa23.53■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms