RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm5737A0A140LI11 423 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Nkx1-1G3UXB3 402 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Trdmt1O55055 415 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Stra6O70491 670 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Msh3P13705 1091 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Kcna2P63141 499 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Ece1Q4PZA2 769 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Amer2Q8CCJ4 672 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Mettl5Q8K1A0 209 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Dnajc19Q9CQV7 116 aa25.29■■□□□ 1.64
Scn1b-201ENSMUST00000098548 ArP19091 899 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Fscn2Q32M02 492 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Kif5bQ61768 963 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Moxd2Q7TT41 619 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Tdp1Q8BJ37 609 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Tmem87aQ8BXN9 555 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Kcnv2Q8CFS6 562 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Pabpc6Q9D4E6 643 aaKnown RBP25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Efhd1Q9D4J1 240 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Tbx20Q9ES03 445 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Hic1Q9R1Y5 733 aa25.28■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Esr2O08537 530 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 WasP70315 520 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Ift88Q61371 824 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Adck2Q6NSR3 617 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Sval3Q76I99 144 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 PicalmQ7M6Y3 660 aaKnown RBP25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 CnstQ8CBC4 711 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Bcl11aQ9QYE3 773 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Ccdc78D3Z5T1 437 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Hoxc6P10629 235 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Taf1bP97358 586 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Bbs9Q811G0 885 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Ccdc38Q8CDN8 563 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Ushbp1Q8R370 680 aa25.27■■□□□ 1.64
Scn1b-201ENSMUST00000098548 Cpb1B2RS76 415 aa25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 SfnO70456 248 aaKnown RBP25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Syt2P46097 422 aa25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Tfe3Q64092 572 aaKnown RBP25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 CrygnQ8VHL5 183 aa25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Trub2Q91WG3 331 aaKnown RBP25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Cbx6Q9DBY5 414 aa25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Lypla2Q9WTL7 231 aa25.26■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Mpp3O88910 568 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Hspa8P63017 646 aaKnown RBP25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Zfp957Q3UT76 567 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Lrrc36Q3V0M2 755 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Meis1Q60954 390 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Antxr2Q6DFX2 487 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Tmem132dQ76HP3 1097 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Txndc16Q7TN22 820 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Cdkn2aipQ8BI72 563 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Ankk1Q8BZ25 745 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Bcas3Q8CCN5 928 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Coa7Q921H9 231 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Ppp1r3gQ9CW07 347 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Extl2Q9ES89 330 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Cnpy2Q9QXT0 182 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Vav3Q9R0C8 847 aa25.25■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Mroh8E9PYI4 1049 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Nek1P51954 1203 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Gabpb2P81069 414 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Muc1Q02496 630 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 YdjcQ14BV6 310 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Nim1kQ8BHI9 436 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Trib2Q8K4K3 343 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Fgd4Q91ZT5 766 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Lamb2Q61292 1799 aa25.24■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Cdc27A2A6Q5 825 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Gm9857F7CXR1 130 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Tff2Q03404 129 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Kiaa1211Q5PR69 1207 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Slc17a8Q8BFU8 601 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Fam155aQ8CCS2 467 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Kcnh7Q9ER47 1195 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Ggps1Q9WTN0 300 aa25.23■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Cul4bA2A432 970 aaKnown RBP25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 4932429P05RikA2ADI4 785 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Gm38392E9Q2A2 434 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Atp9aO70228 1047 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Grm1P97772 1199 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Pank2Q3U4S0 443 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Lrrc14bQ3UJB3 510 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 A1cfQ5YD48 595 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Gpd2Q64521 727 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Arhgef19Q8BWA8 802 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Rnf208Q8K0W3 265 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Zcchc18Q8VD24 393 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Dnajc18Q9CZJ9 357 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Pak1O88643 545 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Adssl1P28650 457 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Cyp2c39P56656 490 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Nlrp2Q4PLS0 1046 aaKnown RBP25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Paxip1Q6NZQ4 1056 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Sdccag8Q80UF4 717 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 C1qtnf12Q8R2Z0 308 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Ccdc94Q9D6J3 314 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 BcamQ9R069 622 aa25.22■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Gm13128L7MU96 475 aa25.21■■□□□ 1.63
Scn1b-201ENSMUST00000098548 Gm10436L7N1Y3 520 aa25.21■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms