RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 March10E9PX79 788 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 MarcksP26645 309 aaKnown RBP23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Ptpn11P35235 597 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Dusp4Q8BFV3 398 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 3830417A13RikQ8BQJ2 303 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Sec62Q8BU14 398 aaKnown RBP23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Mad1l1Q9WTX8 717 aaKnown RBP23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Tle2Q9WVB2 767 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Adamts9E9PUN6 1931 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Dock3Q8CIQ7 2027 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Supt3B0QZW4 406 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Ubash3aQ3V3E1 624 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Lrrcc1Q69ZB0 1026 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Mtmr10Q7TPM9 771 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 1700001K19RikQ80ZT1 219 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Cwf19l2Q8BG79 887 aaKnown RBP23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Samm50Q8BGH2 469 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Pcdhac2Q91Y09 1006 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Coa7Q921H9 231 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Dusp6Q9DBB1 381 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Atp1a4Q9WV27 1032 aa23.62■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 TazI7HJS2 263 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Adam15O88839 864 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 DSCC1Q14AI0 399 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Znf865Q3U3I9 1058 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Tcaf3Q6QR59 914 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 LppQ8BFW7 613 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 DpydQ8CHR6 1025 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Tspyl4Q8VD63 406 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Lmcd1Q8VEE1 365 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Olfr1494Q8VGP8 315 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 CrygnQ8VHL5 183 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Apobec3Q99J72 440 aaKnown RBP23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Arpp21Q9DCB4 807 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Tfr2Q9JKX3 798 aa23.61■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Aldh1a1P24549 501 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 FpgsP48760 587 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Srebf2Q3U1N2 1130 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 GypcQ78HU7 95 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 CnstQ8CBC4 711 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Hs2st1Q8R3H7 356 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Six6os1Q9CTN5 574 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Tmem39aQ9CYC3 486 aa23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 PtmsQ9D0J8 101 aaKnown RBP23.6■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Acvr2bP27040 536 aa23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Lman2lP59481 347 aa23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Epha2Q03145 977 aa23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Madcam1Q61826 405 aa23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Tbc1d22bQ80VE5 505 aa23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 R3hcc1Q8BSI6 488 aa23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 PycardQ9EPB4 193 aa23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Wdr33Q8K4P0 1330 aaKnown RBP23.59■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Atad5Q4QY64 1826 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Pate3B3GLJ3 98 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Dhx15O35286 795 aaKnown RBP23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Wnt7aP24383 349 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Znf800Q0VEE6 662 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Ces1eQ64176 562 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Arrdc3Q7TPQ9 414 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Etv3Q8R4Z4 513 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 Ppp2r2dQ925E7 453 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 NenfQ9CQ45 171 aa23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 AdnpQ9Z103 1108 aaKnown RBP23.58■■□□□ 1.37
Ssbp4-201ENSMUST00000049908 A0A0U1RNP2 1173 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Gm38392E9Q2A2 434 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Api5O35841 504 aaKnown RBP23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Pcif1P59114 706 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Trappc10Q3TLI0 1259 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Gpatch11Q3UFS4 262 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Rnpc3Q3UZ01 514 aaKnown RBP23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Slc9a7Q8BLV3 726 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Oit3Q8R4V5 546 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Tmco4Q91WU4 631 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Smco2Q9DA21 347 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Ccnt1Q9QWV9 724 aaKnown RBP23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Lama3Q61789 3330 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 LctF8VPT3 1931 aa23.57■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Gm11549A0A286YD83 63 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Cyp26c1B2RXA7 518 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Sptlc1O35704 473 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 NcanP55066 1268 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Ahcyl2Q68FL4 613 aaKnown RBP23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 DgkkE9Q7N4 1118 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Cyp27b1O35084 507 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Art2aP17981 287 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Cdc25aP48964 514 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Actr2P61161 394 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Mgat3Q10470 538 aa23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Srek1Q8BZX4 494 aaKnown RBP23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Ptcd2Q8R3K3 381 aaKnown RBP23.56■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Syngap1F6SEU4 1340 aa23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Ktn1Q61595 1327 aaKnown RBP23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Gm3383J3QQ59 259 aa23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Mpp3O88910 568 aa23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Pbxip1Q3TVI8 727 aa23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 KhsrpQ3U0V1 748 aaKnown RBP23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Gm28047Q3US59 414 aa23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Lrrfip1Q3UZ39 729 aaKnown RBP23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Krt87Q6IMF0 495 aa23.55■■□□□ 1.36
Ssbp4-201ENSMUST00000049908 Nap1l4Q78ZA7 375 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms