RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Phldb3E9QAF4 648 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Gm21962L7N280 338 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 GabrdP22933 449 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ephb4P54761 987 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Snap25P60879 206 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Hoxa13Q62424 386 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 P2rx7Q9Z1M0 595 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Eno1P17182 434 aaKnown RBP10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Acot6Q32Q92 419 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Carmil2Q3V3V9 1296 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Brd2Q7JJ13 798 aaKnown RBP10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Dars2Q8BIP0 653 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Slc12a8Q8VI23 705 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Eddm13E9Q7F5 164 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Zc3h18Q0P678 948 aaKnown RBP10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Asap3Q5U464 904 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Trim17Q7TPM3 477 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tcp10aQ80W76 438 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Sap130Q8BIH0 1057 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 L3mbtl3Q8BLB7 883 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ccz1Q8C1Y8 480 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Arhgap29Q8CGF1 1266 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tgs1Q923W1 853 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 CsadQ9DBE0 493 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ddx25Q9QY15 484 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tnip3A0A1D5RMN0 279 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Pald1P70261 859 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Irx1P81068 480 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Kiaa1841Q68FF0 718 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Mysm1Q69Z66 819 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 GypcQ78HU7 95 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Trim52Q8CDV4 233 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Q8CEZ4 452 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Defb15Q8R2I5 79 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 Fhod3Q76LL6 1578 aa10.61□□□□□ -0.71
Syne1-201ENSMUST00000041639 CoblQ5NBX1 1337 aaKnown RBP10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Magi3Q9EQJ9 1476 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Gm29133A0A1B0GT72 266 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Pde6bP23440 856 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Hcls1P49710 486 aaKnown RBP10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Terb1Q8C0V1 768 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 DffaO54786 331 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Slc9a2Q3ZAS0 814 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Cyp7b1Q60991 507 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Mb21d2Q8C525 428 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Thoc1Q8R3N6 657 aaKnown RBP10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Prpsap2Q8R574 369 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Coa7Q921H9 231 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Snx24Q9CRB0 169 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Thap2Q9D305 217 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Kif9Q9WV04 790 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Frmpd4A2AFR3 1320 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Lmo7E9PYF4 1699 aaKnown RBP10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Sept1P42209 366 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Lins1Q3U1D0 764 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Satb1Q60611 764 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Slc9a1Q61165 820 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Fndc3aQ8BX90 1198 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Q8R1Y2 203 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Gimap4Q99JY3 219 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Pls3Q99K51 630 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Abcg3Q99P81 650 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 HelqQ2VPA6 1069 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 TfrcQ62351 763 aaKnown RBP10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Sec23ipQ6NZC7 998 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Pramel6Q810Y9 485 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ppp1r14cQ8R4S0 164 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Usp15Q8R5H1 981 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Cul1Q9WTX6 776 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Mcf2A2AEU1 1111 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Pfdn6Q03958 127 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Git1Q68FF6 770 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 NfrkbQ6PIJ4 1296 aaKnown RBP10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Nsmce1Q9D720 266 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Uggt2E9Q4X2 1504 aa10.6□□□□□ -0.71
Syne1-201ENSMUST00000041639 Gm6657A0A1B0GRJ3 277 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 1700016G14RikA0A286YCZ6 238 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Lrrc23O35125 340 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Sept2P42208 361 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Cyth2P63034 400 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Taf1bP97358 586 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 MlxipQ2VPU4 917 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tmem179Q8BHH9 233 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Klhl38Q8BSF5 581 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Q8C6G1 249 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Rnf112Q96DY5 654 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Myo1cQ9WTI7 1063 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Stx1bP61264 288 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Trim71Q1PSW8 855 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Xxylt1Q3U4G3 392 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Skap2Q3UND0 358 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Caprin1Q60865 707 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Lyve1Q8BHC0 318 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Eif2ak1Q9Z2R9 619 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Olfr552E9Q545 317 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Cyp2c23E9Q5K4 494 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Tfdp1Q08639 410 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Lrch2Q3UMG5 773 aa10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Ccdc84Q4VA36 332 aaKnown RBP10.59□□□□□ -0.71
Syne1-201ENSMUST00000041639 Dync1li2Q6PDL0 492 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms