RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Tcp11Q01755 566 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Upf3bQ3ULL6 472 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Epn1Q80VP1 575 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Znf467Q8JZL0 594 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Myh10Q61879 1976 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Znf598Q80YR4 908 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ccdc77Q9CZH8 489 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Zfp558E9Q1J0 407 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Trim75Q3UWZ0 467 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ppp1r12aQ9DBR7 1029 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Tmod4Q9JLH8 345 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Clasp1Q80TV8 1535 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 1700029H14RikE9PY36 240 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm7535F7CXE4 302 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Atp1a1Q8VDN2 1023 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 AdarQ99MU3 1178 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Abcg3Q99P81 650 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Dynlt1P51807 113 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Sesn2P58043 480 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Epas1P97481 874 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Phf20l1Q8CCJ9 1013 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Vwa5aQ99KC8 793 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Rrp15Q9CYX7 281 aaKnown RBP14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Fads3Q9JJE7 449 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ulk4Q3V129 1303 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 PzpQ61838 1495 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Mdh1P14152 334 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 XpcP51612 930 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Snrnp27Q8K194 155 aa14.98□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm11985A0A1B0GS61 206 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm5414Q6IFZ8 552 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Trim12aQ99PQ1 284 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Erp44Q9D1Q6 406 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 LratQ9JI60 231 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Npc1l1Q6T3U4 1333 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Prdm11A2AGX3 565 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Sult1d1Q3UZZ6 295 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Cep126Q0VBV7 1103 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 HiraQ61666 1015 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Q80Y73 168 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gpcpd1Q8C0L9 675 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Cpsf3Q9QXK7 684 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Map3k12Q60700 888 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Psmd10Q9Z2X2 231 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 CiitaP79621 1155 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 6820408C15RikQ8BJX2 354 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm29133A0A1B0GT72 266 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Apol11bE9PUZ0 337 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ddx39aQ8VDW0 427 aaKnown RBP14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Tceal1Q921P9 165 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Q9DAQ4 598 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 AnkarA2RT91 1465 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Pex11aQ9Z211 246 aa14.97□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm28360A0A087WR25 190 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm20425E9Q035 978 aaKnown RBP14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Axin2O88566 840 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 SrprbP47758 269 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ckap2Q3V1H1 664 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Znf518aB2RRF6 1478 aaKnown RBP14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Col17a1Q07563 1470 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Cacna2d1O08532 1103 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Lmntd2Q0VET5 664 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Pdik1lQ8QZR7 341 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Myom2Q14BI5 1463 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Per2O54943 1257 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Kcna1P16388 495 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 PpargP37238 505 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Stambpl1Q76N33 436 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 NkapQ9D0F4 415 aaKnown RBP14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Caln1Q9JJG7 219 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Ttc17E9PVB5 1198 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Serpinb8O08800 374 aaKnown RBP14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Appl2Q8K3G9 662 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Krt24A1L317 512 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Creb3l3Q91XE9 479 aa14.96□□□□□ -0.01
Col5a1-201ENSMUST00000028280 Gm5580A0A0N4SVP8 411 aa14.96□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ttc13A0A1L1SSC7 844 aa14.96□□□□□ -0.02
Col5a1-201ENSMUST00000028280 S100a9P31725 113 aa14.96□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Arl4aP61213 200 aa14.96□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Maml3D4QGC2 1135 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Plekha5E9Q6H8 1269 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ets1P27577 440 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tmcc1Q69ZZ6 649 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Phf21aQ6ZPK0 659 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Swi5Q8K3D3 89 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 DgkkE9Q7N4 1118 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Idh1O88844 414 aaKnown RBP14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Nrbp1Q99J45 535 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Elmsan1E9Q2I4 1089 aaKnown RBP14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Eno1P17182 434 aaKnown RBP14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tas2r124Q7M718 309 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Taf5lQ91WQ5 589 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Nphp4P59240 1425 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 A530032D15RikE9Q422 215 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Krt10P02535 570 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Kiaa1841Q68FF0 718 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Me3Q8BMF3 604 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Rmdn2Q8BSE0 410 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gins2Q9D600 185 aa14.95□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Prdm2A2A7B5 1709 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms