RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Magea5O89009 320 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 OatP29758 439 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Nkx2-5P42582 318 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Atp11aP98197 1187 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Agbl1Q09M05 972 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gbp4Q61107 620 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Zbtb7bQ64321 544 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gm2163Q6PCY5 473 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tmc4Q7TQ65 694 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 ClasrpQ8CFC7 668 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Magea2Q9R2A2 320 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Stat2Q9WVL2 923 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Sept3Q9Z1S5 350 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 NalcnQ8BXR5 1738 aa11.87□□□□□ -0.51
Msh3-201ENSMUST00000022220 Flvcr1B2RXV4 560 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Rexo5D3YW29 759 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Foxn2E9Q7L6 429 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Cpsf2O35218 782 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ctnnd1P30999 938 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Nr1d1Q3UV55 615 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Nlrp4fQ66X05 959 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Pabpc4Q6PHQ9 660 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ccdc25Q78PG9 208 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Klhl7Q8BUL5 586 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Atp5c1Q91VR2 298 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Arhgef10lA2AWP8 1280 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Zc3h7bF8VPP8 982 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 FosP01101 380 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 NeblQ0II04 452 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Dppa3Q8QZY3 150 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Q91WD4 421 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 1700020D05RikQ99PB1 294 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tob2Q9JM55 345 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Lrrc4bP0C192 709 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Dnm2P39054 870 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Sem1P60897 70 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 LdhdQ7TNG8 484 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Haus1Q8BHX1 278 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Trmt2aQ8BNV1 574 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gprasp2Q8BUY8 826 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Lman1lQ8VCD3 505 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 Fam133bQ9CVI2 245 aaKnown RBP11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 MesdQ9ERE7 224 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 ErmapQ9JLN5 566 aa11.86□□□□□ -0.51
Msh3-201ENSMUST00000022220 C5P06684 1680 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 GabreA2AMW3 916 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 4930523C07RikE9Q2T4 99 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tpp1O89023 562 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Nlrp4cQ3TKR3 982 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Arhgef16Q3U5C8 713 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tnni3kQ5GIG6 834 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Serpinb6Q60854 378 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Hook2Q7TMK6 716 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Pank4Q80YV4 820 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Micall1Q8BGT6 870 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Kirrel3Q8BR86 778 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Q8BWG4 1187 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Pak2Q8CIN4 524 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Plekhg6Q8R0J1 787 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Usp15Q8R5H1 981 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ppp1r16bQ8VHQ3 568 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Cep83Q9D5R3 692 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Peg12Q9WVA7 283 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Arfgef2A2A5R2 1792 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ugt1a8D3Z748 530 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ugt1a10E9PXN7 530 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Speer4f2E9Q366 295 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tnni3P48787 211 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Kmt5aQ2YDW7 349 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Tax1bp1Q3UKC1 814 aaKnown RBP11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Fhdc1Q3ULZ2 1149 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Foxn3Q499D0 457 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Phf8Q80TJ7 1023 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 SpidrQ8BGX7 933 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Spata2Q8K004 515 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Slit2Q9R1B9 1521 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 1700016G14RikA0A286YCZ6 238 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 4932429P05RikA2ADI4 785 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Mroh9G5E8L9 891 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Serpinb1cQ5SV42 375 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ehbp1Q69ZW3 1231 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Slc51bQ80WK2 128 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Kctd6Q8BNL5 237 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Acot11Q8VHQ9 594 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Cd2bp2Q9CWK3 342 aaKnown RBP11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 ToporslQ9D2F8 683 aa11.85□□□□□ -0.51
Msh3-201ENSMUST00000022220 Apol6B7ZC55 329 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ppp4cP97470 307 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Esyt2Q3TZZ7 845 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Trip13Q3UA06 432 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Gprin1Q3UNH4 932 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Mapk4Q6P5G0 583 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Sap130Q8BIH0 1057 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ccdc38Q8CDN8 563 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Phc3Q8CHP6 981 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ppp1r11Q8K1L5 131 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Ivns1abpQ920Q8 642 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Cmtm5Q9D6G9 156 aa11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 N4bp2F8VQG7 1678 aaKnown RBP11.84□□□□□ -0.51
Msh3-201ENSMUST00000022220 Map2k1P31938 393 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms