RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Armc3A2AU72 881 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Trappc11B2RXC1 1133 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Dctn1O08788 1281 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ebf2O08792 575 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pja1O55176 578 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 ProcP33587 460 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ephb4P54761 987 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Siah1aP61092 282 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Znf280dQ68FE8 974 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Q6PD19 689 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Stn1Q8K2X3 378 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Kbtbd4Q8R179 534 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gimap7Q8R379 293 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Dnajc17Q91WT4 303 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Mettl13Q91YR5 698 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cabp7Q91ZM8 215 aa13.23□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Osbpl9A2A8Z1 736 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Apol7aB2RT54 418 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Wdr72D3YYM4 1114 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 RcvrnP34057 202 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gspt2Q149F3 632 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Nhej1Q3KNJ2 295 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Spata5Q3UMC0 893 aaKnown RBP13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Zc3h12cQ5DTV4 884 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Rgl2Q61193 778 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Krt40Q6IFX3 439 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 C2cd2lQ80X80 706 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pwp2Q8BU03 919 aaKnown RBP13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Parp10Q8CIE4 960 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Hs2st1Q8R3H7 356 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 St5Q924W7 1134 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Trim34aQ99PP6 485 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Bub1bQ9Z1S0 1052 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 4931408C20RikE9PWP9 1381 aa13.22□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gm4985A2ALC6 410 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Itga9B8JK39 1036 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Stag2O35638 1231 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Casp8O89110 480 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Prl7d1P04769 244 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Slc7a3P70423 618 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Tbc1d2bQ3U0J8 965 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cacna2d4Q5RJF7 1116 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Klra5Q60652 266 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Shc3Q61120 474 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ccna1Q61456 421 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Asic1Q6NXK8 526 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Gimap8Q75N62 688 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ece2Q80Z60 881 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Snx14Q8BHY8 964 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ufl1Q8CCJ3 793 aaKnown RBP13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Eif2b5Q8CHW4 717 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Rassf9Q8K342 435 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Cfap57Q9D180 1249 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Rwdd2aQ9D9S3 292 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Col4a5Q63ZW6 1691 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Lamb1P02469 1786 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Zbtb7aO88939 569 aaKnown RBP13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ercc5P35689 1170 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Ptprn2P80560 1001 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Kcnma1Q08460 1209 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Carmil2Q3V3V9 1296 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 LrmpQ60664 539 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 HelbQ6NVF4 1074 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Pkn3Q8K045 878 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Nup58Q8R332 587 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Washc1Q8VDD8 475 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 MlphQ91V27 590 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 PccaQ91ZA3 724 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Dbndd1Q9CZ00 160 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Mtmr9Q9Z2D0 545 aa13.21□□□□□ -0.29
Ufd1-201ENSMUST00000005394 Zfp646Q6NV66 1788 aa13.21□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Slfn8B1ARD8 910 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Apol6B7ZC55 329 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Hsf3D0VYS2 492 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Zfp651E9PZ11 729 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Gm5814J3QP80 125 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Eftud2O08810 971 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Bnip3O55003 187 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 P4hbP09103 509 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ctnna1P26231 906 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ighmbp2P40694 993 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Msh2P43247 935 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Fam207aP58468 219 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Traf5P70191 558 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ankrd13cQ3UX43 541 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ehmt1Q5DW34 1296 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Mcm7Q61881 719 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Cyp7a1Q64505 503 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Swap70Q6A028 585 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 PrimpolQ6P1E7 537 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Haus1Q8BHX1 278 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ccdc28bQ8CEG5 200 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Lsm14bQ8CGC4 385 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Psmd2Q8VDM4 908 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Ppp2r5dQ91V89 594 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Trub2Q91WG3 331 aaKnown RBP13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Mrfap1Q9CQL7 125 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Snrnp35Q9D384 244 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Cul5Q9D5V5 780 aa13.2□□□□□ -0.3
Ufd1-201ENSMUST00000005394 Gtf3c6Q9D8P7 227 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms