RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	BRO1	P48582	844 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	RPL4B	P49626	362 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	YGR111W	P53265	400 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	ATG16	Q03818	150 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	URH1	Q04179	340 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YDR278C	Q05612	105 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	SHS1	Q07657	551 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	SGT2	Q12118	346 aa	Known RBP	2.73	□□□□□ -1.97
HAA1	YPR008W	INP53	Q12271	1107 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YBL111C	Q3E7Y5	667 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YKL068W-A	Q3E826	78 aa		2.73	□□□□□ -1.97
HAA1	YPR008W	YLR302C	O13544	120 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	SGV1	P23293	657 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	LOS1	P33418	1100 aa	Predicted RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	SNU114	P36048	1008 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	CAB3	P36076	571 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	RRT2	P38332	387 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	UBA4	P38820	440 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	CIN4	P39110	191 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	RIC1	P40395	1056 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	SAP185	P40856	1058 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	MIC19	P43594	170 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	JJJ1	P53863	590 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	ERV41	Q04651	352 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	YDR222W	Q04925	415 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	RTP1	Q12751	981 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	YOL087C	Q99247	1116 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	BI3	Q9ZZW7	517 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	ADE4	P04046	510 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	DBF4	P32325	704 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	ERG1	P32476	496 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	NFU1	P32860	256 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	UBC6	P33296	250 aa	Predicted RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	MUD2	P36084	527 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	ALY1	P36117	915 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	END3	P39013	349 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	DHH1	P39517	506 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	ALD5	P40047	520 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	RGI2	P40188	164 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	AZR1	P50080	613 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	HOP2	P53187	214 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	CRZ1	P53968	678 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	GYL1	Q04322	720 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	SNO4	Q04902	237 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	HSP33	Q08914	237 aa	Known RBP	2.72	□□□□□ -1.97
HAA1	YPR008W	HSP32	Q08992	237 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	YBR298C-A	Q8TGK4	73 aa		2.72	□□□□□ -1.97
HAA1	YPR008W	YBR085C-A	O43137	85 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	CHS1	P08004	1131 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	EST1	P17214	699 aa	Predicted RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	MRP4	P32902	394 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	YOX1	P34161	385 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	YBL055C	P34220	418 aa	Predicted RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	PHD1	P36093	366 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	LAS1	P36146	502 aa	Predicted RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	OLA1	P38219	394 aa	Known RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	MMS21	P38632	267 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	YER010C	P40011	234 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	KAP123	P40069	1113 aa	Known RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	YER186C	P40101	306 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	SLZ1	P40167	298 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	YNL320W	P42840	284 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	YNL134C	P53912	376 aa	Known RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	MUB1	Q03162	620 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	CWC21	Q03375	135 aa	Known RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	CDD1	Q06549	142 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	RIO1	Q12196	484 aa	Known RBP	2.71	□□□□□ -1.98
HAA1	YPR008W	CTF3	Q12748	733 aa		2.71	□□□□□ -1.98
HAA1	YPR008W	EFB1	P32471	206 aa	Known RBP	2.7	□□□□□ -1.98
HAA1	YPR008W	GYP6	P32806	458 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	BUD2	P33314	1104 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	NOP4	P37838	685 aa	Known RBP	2.7	□□□□□ -1.98
HAA1	YPR008W	AGP2	P38090	596 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	MSG5	P38590	489 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	YHL026C	P38740	315 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	YHR054C	P38780	354 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	SNZ3	P43545	298 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	LAM5	P43560	674 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	ASG7	P46993	209 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	SNZ2	P53824	298 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	ALG11	P53954	548 aa	Known RBP	2.7	□□□□□ -1.98
HAA1	YPR008W	INA17	Q02888	182 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	VPS72	Q03388	795 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	YMR087W	Q04299	284 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	FMP45	Q07651	309 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	RDR1	Q08904	546 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	ECM29	P38737	1868 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	RAD10	P06838	210 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	PEP5	P12868	1029 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	TRX1	P22217	103 aa	Known RBP	2.7	□□□□□ -1.98
HAA1	YPR008W	ACH1	P32316	526 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	SPP381	P38282	291 aa	Predicted RBP	2.7	□□□□□ -1.98
HAA1	YPR008W	PCA1	P38360	1216 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	TVP23	P38962	199 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	BUR6	P40096	142 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	CTK3	P46963	296 aa	Predicted RBP	2.7	□□□□□ -1.98
HAA1	YPR008W	YJR054W	P47114	497 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	MND1	P53102	219 aa		2.7	□□□□□ -1.98
HAA1	YPR008W	TDA7	P53882	636 aa	Predicted RBP	2.7	□□□□□ -1.98
HAA1	YPR008W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms