RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W RAP1P11938 827 aa3.73□□□□□ -1.81
VPS27YNR006W TKL1P23254 680 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W CLB2P24869 491 aa3.73□□□□□ -1.81
VPS27YNR006W MGR1P25573 417 aa3.73□□□□□ -1.81
VPS27YNR006W MRPL9P31334 269 aa3.73□□□□□ -1.81
VPS27YNR006W PRP21P32524 280 aaPredicted RBP3.73□□□□□ -1.81
VPS27YNR006W DOA4P32571 926 aa3.73□□□□□ -1.81
VPS27YNR006W YSC83P32792 385 aa3.73□□□□□ -1.81
VPS27YNR006W RPC34P32910 317 aa3.73□□□□□ -1.81
VPS27YNR006W SHP1P34223 423 aa3.73□□□□□ -1.81
VPS27YNR006W SOR1P35497 357 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W OLA1P38219 394 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W SPP381P38282 291 aaPredicted RBP3.73□□□□□ -1.81
VPS27YNR006W STP2P38704 541 aa3.73□□□□□ -1.81
VPS27YNR006W TOM71P38825 639 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W CCT2P39076 527 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W YGL117WP53133 265 aa3.73□□□□□ -1.81
VPS27YNR006W ATG38Q05789 226 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W YLR455WQ06188 304 aa3.73□□□□□ -1.81
VPS27YNR006W SOR2Q07786 357 aa3.73□□□□□ -1.81
VPS27YNR006W THP1Q08231 455 aa3.73□□□□□ -1.81
VPS27YNR006W RBD2Q12270 262 aa3.73□□□□□ -1.81
VPS27YNR006W SSA3P09435 649 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W MEK1P24719 497 aaPredicted RBP3.73□□□□□ -1.81
VPS27YNR006W ATP11P32453 318 aa3.73□□□□□ -1.81
VPS27YNR006W DPH5P32469 300 aaPredicted RBP3.73□□□□□ -1.81
VPS27YNR006W MSN2P33748 704 aa3.73□□□□□ -1.81
VPS27YNR006W MSN4P33749 630 aa3.73□□□□□ -1.81
VPS27YNR006W YMC2P38087 329 aa3.73□□□□□ -1.81
VPS27YNR006W QDR3P38227 689 aa3.73□□□□□ -1.81
VPS27YNR006W RRP4P38792 359 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W END3P39013 349 aa3.73□□□□□ -1.81
VPS27YNR006W INA22P40576 216 aa3.73□□□□□ -1.81
VPS27YNR006W TDA10P42938 290 aa3.73□□□□□ -1.81
VPS27YNR006W LYS20P48570 428 aaKnown RBP3.73□□□□□ -1.81
VPS27YNR006W MNT4P53745 580 aa3.73□□□□□ -1.81
VPS27YNR006W PFA5Q03289 374 aa3.73□□□□□ -1.81
VPS27YNR006W CAB5Q03941 241 aa3.73□□□□□ -1.81
VPS27YNR006W RRG8Q06109 277 aa3.73□□□□□ -1.81
VPS27YNR006W YLL007CQ07799 665 aa3.73□□□□□ -1.81
VPS27YNR006W SUT2Q12286 268 aa3.73□□□□□ -1.81
VPS27YNR006W YPT1P01123 206 aaKnown RBP3.72□□□□□ -1.81
VPS27YNR006W CAR2P07991 424 aaKnown RBP3.72□□□□□ -1.81
VPS27YNR006W PRB1P09232 635 aa3.72□□□□□ -1.81
VPS27YNR006W YMR085WP0CF18 432 aa3.72□□□□□ -1.81
VPS27YNR006W ERG11P10614 530 aa3.72□□□□□ -1.81
VPS27YNR006W NRP1P32770 719 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
VPS27YNR006W MIA40P36046 403 aa3.72□□□□□ -1.81
VPS27YNR006W YBL028CP38202 106 aa3.72□□□□□ -1.81
VPS27YNR006W RRN10P38204 145 aa3.72□□□□□ -1.81
VPS27YNR006W GAT2P40209 560 aa3.72□□□□□ -1.81
VPS27YNR006W SDS3P40505 327 aa3.72□□□□□ -1.81
VPS27YNR006W SYG1P40528 902 aa3.72□□□□□ -1.81
VPS27YNR006W GCN20P43535 752 aaKnown RBP3.72□□□□□ -1.81
VPS27YNR006W KEL2P50090 882 aa3.72□□□□□ -1.81
VPS27YNR006W PIB2P53191 635 aa3.72□□□□□ -1.81
VPS27YNR006W INP2Q03824 705 aa3.72□□□□□ -1.81
VPS27YNR006W YPR078CQ06813 372 aa3.72□□□□□ -1.81
VPS27YNR006W RAD52P06778 471 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W ARG80P07249 177 aa3.71□□□□□ -1.82
VPS27YNR006W GPA1P08539 472 aa3.71□□□□□ -1.82
VPS27YNR006W MRP2P10663 115 aaPredicted RBP3.71□□□□□ -1.82
VPS27YNR006W THR4P16120 514 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W MER1P16523 270 aa3.71□□□□□ -1.82
VPS27YNR006W HXT2P23585 541 aa3.71□□□□□ -1.82
VPS27YNR006W SMY1P32364 656 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W SAC1P32368 623 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W MOH1P38191 138 aa3.71□□□□□ -1.82
VPS27YNR006W UBA4P38820 440 aa3.71□□□□□ -1.82
VPS27YNR006W YHR122WP38829 231 aa3.71□□□□□ -1.82
VPS27YNR006W SPC97P38863 823 aa3.71□□□□□ -1.82
VPS27YNR006W BDH2P39713 417 aa3.71□□□□□ -1.82
VPS27YNR006W ERV46P39727 415 aa3.71□□□□□ -1.82
VPS27YNR006W SAS2P40963 338 aa3.71□□□□□ -1.82
VPS27YNR006W SNG1P46950 547 aa3.71□□□□□ -1.82
VPS27YNR006W BIO3P50277 480 aa3.71□□□□□ -1.82
VPS27YNR006W ZPR1P53303 486 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W CPR8P53728 308 aa3.71□□□□□ -1.82
VPS27YNR006W AAT1Q01802 451 aa3.71□□□□□ -1.82
VPS27YNR006W ATC1Q04005 294 aa3.71□□□□□ -1.82
VPS27YNR006W GFD1Q04839 188 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W SNT309Q06091 175 aaPredicted RBP3.71□□□□□ -1.82
VPS27YNR006W ATG26Q06321 1198 aa3.71□□□□□ -1.82
VPS27YNR006W THI3Q07471 609 aa3.71□□□□□ -1.82
VPS27YNR006W NSE1Q07913 336 aa3.71□□□□□ -1.82
VPS27YNR006W CDC42P19073 191 aa3.71□□□□□ -1.82
VPS27YNR006W NUP1P20676 1076 aa3.71□□□□□ -1.82
VPS27YNR006W HSP104P31539 908 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W BNA4P38169 460 aa3.71□□□□□ -1.82
VPS27YNR006W ALP1P38971 573 aa3.71□□□□□ -1.82
VPS27YNR006W YPS6P40583 537 aa3.71□□□□□ -1.82
VPS27YNR006W SPG5P42933 373 aa3.71□□□□□ -1.82
VPS27YNR006W PHO86P46956 311 aa3.71□□□□□ -1.82
VPS27YNR006W YHC3P47040 408 aa3.71□□□□□ -1.82
VPS27YNR006W YGL114WP53134 725 aa3.71□□□□□ -1.82
VPS27YNR006W BUD32P53323 261 aa3.71□□□□□ -1.82
VPS27YNR006W YNL134CP53912 376 aaKnown RBP3.71□□□□□ -1.82
VPS27YNR006W TIM44Q01852 431 aa3.71□□□□□ -1.82
VPS27YNR006W YMR102CQ03177 834 aa3.71□□□□□ -1.82
VPS27YNR006W YLR173WQ06247 608 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms