RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	AGE1	Q04412	482 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	HDA3	Q06623	655 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	HDA2	Q06629	674 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	SCP1	Q08873	200 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	TMA46	Q12000	345 aa	Known RBP	3.21	□□□□□ -1.89
SQS1	YNL224C	ELG1	Q12050	791 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	DCN1	Q12395	269 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	EMP46	Q12396	444 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	PET20	Q99373	253 aa		3.21	□□□□□ -1.89
SQS1	YNL224C	CDC8	P00572	216 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	RNR2	P09938	399 aa	Known RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	SCH9	P11792	824 aa	Known RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	GAL3	P13045	520 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	SNF6	P18888	332 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	MEK1	P24719	497 aa	Predicted RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	RNA14	P25298	677 aa	Known RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	DCC1	P25559	380 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	PHA2	P32452	334 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	ECM25	P32525	599 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	MSS1	P32559	526 aa	Predicted RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	VAM7	P32912	316 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	SLC1	P33333	303 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	TAF14	P35189	244 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	TVP38	P36164	337 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	VBA5	P36172	582 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	YCR087C-A	P37263	153 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	HSL7	P38274	827 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	BDH1	P39714	382 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	RBG1	P39729	369 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	ECM10	P39987	644 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	YEL020C	P39994	560 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	VRG4	P40107	337 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	RRD1	P40454	393 aa	Known RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	CSM2	P40465	213 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	CAB2	P40506	365 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	SMK1	P41808	388 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	MRPS18	P42847	217 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	YFR018C	P43599	363 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	SLD3	P53135	668 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	IMO32	P53219	342 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	DRN1	P53255	507 aa	Known RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	RRP46	P53256	223 aa	Predicted RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	NOP19	P53317	196 aa	Predicted RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	CAF40	P53829	373 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	YNL143C	P53908	130 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	YNL140C	P53910	189 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	NMA111	P53920	997 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	MTG1	Q03151	367 aa	Predicted RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	YMR279C	Q03263	540 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	SMA2	Q04658	369 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	PUN1	Q06991	263 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	SPO75	Q07798	868 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	NSE1	Q07913	336 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	YLR036C	Q07986	203 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	PEX15	Q08215	383 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	CRT10	Q08226	957 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	BSC6	Q08280	497 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	TMA16	Q08687	178 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	HRK1	Q08732	759 aa	Known RBP	3.21	□□□□□ -1.9
SQS1	YNL224C	YOR114W	Q12219	294 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	YDR061W	Q12298	539 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	DGK1	Q12382	290 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	AGC1	Q12482	902 aa		3.21	□□□□□ -1.9
SQS1	YNL224C	STE2	D6VTK4	431 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	RPP2A	P05319	106 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	TUB1	P09733	447 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	RPS21A	P0C0V8	87 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	HXT2	P23585	541 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PRE9	P23638	258 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	ERG6	P25087	383 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	CWP1	P28319	239 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	CTS1	P29029	562 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	AFG1	P32317	509 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PYC2	P32327	1180 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	UGX2	P32772	223 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	NGR1	P32831	672 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	DOA1	P36037	715 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	TCD2	P36101	447 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	AIM29	P36154	155 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YPK3	P38070	525 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	DTR1	P38125	572 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YBR284W	P38150	797 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	SRO77	P38163	1010 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PTC7	P38797	343 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YHR122W	P38829	231 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	UIP3	P39547	235 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	INP51	P40559	946 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	IDP2	P41939	412 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	EMW1	P42842	904 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	PRM10	P42946	383 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	RTT101	P47050	842 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	TAD1	P53065	400 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	FMP48	P53233	369 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YGR126W	P53274	230 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	TNA1	P53322	534 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YTP1	P53584	459 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	TEP1	P53916	434 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	SDH1	Q00711	640 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ECM9	Q02202	377 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PRM15	Q03262	622 aa		3.2	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms