RNA–Protein interactions for RNA: YNL112W

DBP2, Transcript of ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP2	YNL112W	STE6	P12866	1290 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	TRM1	P15565	570 aa	Known RBP	15.28	■□□□□ 0.04
DBP2	YNL112W	PET127	P32606	800 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	NTR2	P36118	322 aa	Predicted RBP	15.28	■□□□□ 0.04
DBP2	YNL112W	YBR241C	P38142	488 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	VHR1	P40522	640 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	DSL1	P53847	754 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	MUS81	Q04149	632 aa	Predicted RBP	15.28	■□□□□ 0.04
DBP2	YNL112W	MFG1	Q07684	458 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	PFK27	Q12471	397 aa	Predicted RBP	15.28	■□□□□ 0.04
DBP2	YNL112W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	15.28	■□□□□ 0.04	not detected
DBP2	YNL112W	PIM1	P36775	1133 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	APT2	P36973	181 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	GVP36	P40531	326 aa	Known RBP	15.28	■□□□□ 0.04
DBP2	YNL112W	SNL1	P40548	159 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	MSC1	Q03104	513 aa		15.28	■□□□□ 0.04
DBP2	YNL112W	SLH1	P53327	1967 aa	Known RBP	15.27	■□□□□ 0.04
DBP2	YNL112W	CLB4	P24871	460 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	AGP1	P25376	633 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	NTG1	P31378	399 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	ARP2	P32381	391 aa	Known RBP	15.27	■□□□□ 0.03
DBP2	YNL112W	RCK1	P38622	512 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	CIS3	P47001	227 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	HXT16	P47185	567 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	GOR1	P53839	350 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	SWS2	P53937	143 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	HXT15	P54854	567 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	TRM82	Q03774	444 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	REH1	Q06709	432 aa		15.27	■□□□□ 0.03
DBP2	YNL112W	TIM9	O74700	87 aa		15.26	■□□□□ 0.03
DBP2	YNL112W	ARA1	P38115	344 aa		15.26	■□□□□ 0.03
DBP2	YNL112W	ARR1	Q06596	294 aa		15.26	■□□□□ 0.03
DBP2	YNL112W	YPR022C	Q12139	1133 aa		15.26	■□□□□ 0.03
DBP2	YNL112W	SPT16	P32558	1035 aa	Known RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	SFC1	P33303	322 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	YAL037W	P39728	267 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	ELP2	P42935	788 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	SDT1	P53078	280 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	ARI1	P53111	347 aa	Known RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	SSQ1	Q05931	657 aa	Predicted RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	YPR097W	Q06839	1073 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	REX4	Q08237	289 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	GET4	Q12125	312 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	WTM1	Q12363	437 aa	Known RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	YPR064W	Q12492	139 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	MDM35	O60200	86 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	ADE1	P27616	306 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	STP2	P38704	541 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	CEM1	P39525	442 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	RBG1	P39729	369 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	MNT3	P40549	630 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	PRM10	P42946	383 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	BNA3	P47039	444 aa	Known RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	YJL043W	P47053	257 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	ARE2	P53629	642 aa	Known RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	YNR068C	P53754	272 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	MTQ2	Q03920	221 aa	Predicted RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	RRP45	Q05636	305 aa	Known RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	PDR8	Q06149	701 aa		15.25	■□□□□ 0.03
DBP2	YNL112W	RRP40	Q08285	240 aa	Known RBP	15.25	■□□□□ 0.03
DBP2	YNL112W	LAT1	P12695	482 aa	Known RBP	15.24	■□□□□ 0.03
DBP2	YNL112W	MDJ1	P35191	511 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	PCF11	P39081	626 aa	Predicted RBP	15.24	■□□□□ 0.03
DBP2	YNL112W	YEL020C	P39994	560 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	MAD2	P40958	196 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	AGP3	P43548	558 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	FHN1	P53279	174 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	YPL071C	Q02864	156 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	YKU80	Q04437	629 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	GAD1	Q04792	585 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	YML053C	Q04978	212 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	PUN1	Q06991	263 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	COS7	Q07788	383 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	BMT6	Q12291	365 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	MHF2	Q3E829	80 aa		15.24	■□□□□ 0.03
DBP2	YNL112W	CBP2	P03874	630 aa	Predicted RBP	15.23	■□□□□ 0.03
DBP2	YNL112W	MAP2	P38174	421 aa	Known RBP	15.23	■□□□□ 0.03
DBP2	YNL112W	MNN9	P39107	395 aa	Known RBP	15.23	■□□□□ 0.03
DBP2	YNL112W	DCP2	P53550	970 aa	Known RBP	15.23	■□□□□ 0.03
DBP2	YNL112W	NSI1	Q12457	570 aa		15.23	■□□□□ 0.03
DBP2	YNL112W	FMP27	Q06179	2628 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	RPS17A	P02407	136 aa	Known RBP	15.22	■□□□□ 0.03
DBP2	YNL112W	ATR1	P13090	542 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	RPS17B	P14127	136 aa	Known RBP	15.22	■□□□□ 0.03
DBP2	YNL112W	DMC1	P25453	334 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	NUP2	P32499	720 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	DOM34	P33309	386 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	YHR033W	P38690	423 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	LYS1	P38998	373 aa	RIP-Chip data	15.22	■□□□□ 0.03	not detected
DBP2	YNL112W	ELO1	P39540	310 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	RIO2	P40160	425 aa	Known RBP	15.22	■□□□□ 0.03
DBP2	YNL112W	RIC1	P40395	1056 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	YJL049W	P47048	450 aa		15.22	■□□□□ 0.03
DBP2	YNL112W	DTD1	Q07648	150 aa	Known RBP	15.22	■□□□□ 0.03
DBP2	YNL112W	HTA1	P04911	132 aa	Known RBP	15.21	■□□□□ 0.03
DBP2	YNL112W	SSO1	P32867	290 aa		15.21	■□□□□ 0.03
DBP2	YNL112W	RSP5	P39940	809 aa	Known RBP	15.21	■□□□□ 0.03
DBP2	YNL112W	YLR036C	Q07986	203 aa		15.21	■□□□□ 0.03
DBP2	YNL112W	THP1	Q08231	455 aa		15.21	■□□□□ 0.03
DBP2	YNL112W	RPN8	Q08723	338 aa	Known RBP	15.21	■□□□□ 0.03

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms