RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C TIP20P33891 701 aa4.72□□□□□ -1.65
NUP116YMR047C YBR062CP38239 180 aa4.72□□□□□ -1.65
NUP116YMR047C CYC2P38909 366 aa4.72□□□□□ -1.65
NUP116YMR047C YDR089WP38966 869 aa4.72□□□□□ -1.65
NUP116YMR047C PCL7P40186 285 aa4.72□□□□□ -1.65
NUP116YMR047C RGI2P40188 164 aa4.72□□□□□ -1.65
NUP116YMR047C IDS2P46958 469 aa4.72□□□□□ -1.65
NUP116YMR047C TMA22P47089 198 aaPredicted RBP4.72□□□□□ -1.65
NUP116YMR047C CPR6P53691 371 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C ARP4P80428 489 aa4.72□□□□□ -1.65
NUP116YMR047C DIG1Q03063 452 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C RPC11Q04307 110 aaPredicted RBP4.72□□□□□ -1.65
NUP116YMR047C RBS1Q05672 457 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C CRR1Q05790 422 aa4.72□□□□□ -1.65
NUP116YMR047C YLR031WQ07978 186 aa4.72□□□□□ -1.65
NUP116YMR047C YOL024WQ08172 172 aa4.72□□□□□ -1.65
NUP116YMR047C LAG2Q92325 660 aa4.72□□□□□ -1.65
NUP116YMR047C DCC1P25559 380 aa4.72□□□□□ -1.65
NUP116YMR047C VMA6P32366 345 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C SPR1P32603 445 aa4.72□□□□□ -1.65
NUP116YMR047C MRS6P32864 603 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C ANR2P36090 516 aaPredicted RBP4.72□□□□□ -1.65
NUP116YMR047C YEL073CP39974 107 aa4.72□□□□□ -1.65
NUP116YMR047C PAN6P40459 309 aa4.72□□□□□ -1.65
NUP116YMR047C YGR054WP53235 642 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C RBG2P53295 368 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C SDH1Q00711 640 aa4.72□□□□□ -1.65
NUP116YMR047C YOL019WQ08157 551 aa4.72□□□□□ -1.65
NUP116YMR047C AIM41Q12032 185 aa4.72□□□□□ -1.65
NUP116YMR047C LEU9Q12166 604 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C NCA2Q12374 616 aa4.72□□□□□ -1.65
NUP116YMR047C ATG22P25568 528 aa4.72□□□□□ -1.65
NUP116YMR047C NDI1P32340 513 aa4.72□□□□□ -1.65
NUP116YMR047C IRS4P36115 615 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C GMH1P36125 273 aa4.72□□□□□ -1.65
NUP116YMR047C SBE22P38814 852 aa4.72□□□□□ -1.65
NUP116YMR047C PAC1P39946 494 aaKnown RBP4.72□□□□□ -1.65
NUP116YMR047C HPM1P40481 377 aa4.72□□□□□ -1.65
NUP116YMR047C YJL049WP47048 450 aa4.72□□□□□ -1.65
NUP116YMR047C YJL016WP47072 561 aa4.72□□□□□ -1.65
NUP116YMR047C RPC17P47076 161 aa4.72□□□□□ -1.65
NUP116YMR047C HUA2Q12134 243 aa4.72□□□□□ -1.65
NUP116YMR047C AMD2P22580 549 aa4.71□□□□□ -1.66
NUP116YMR047C FUN30P31380 1131 aa4.71□□□□□ -1.66
NUP116YMR047C TPO5P36029 618 aa4.71□□□□□ -1.66
NUP116YMR047C MRP21P38175 177 aa4.71□□□□□ -1.66
NUP116YMR047C RRP3P38712 501 aaKnown RBP4.71□□□□□ -1.66
NUP116YMR047C COX16P47081 118 aa4.71□□□□□ -1.66
NUP116YMR047C VHS1Q03785 461 aa4.71□□□□□ -1.66
NUP116YMR047C ATG10Q07879 167 aa4.71□□□□□ -1.66
NUP116YMR047C XYL2Q07993 356 aa4.71□□□□□ -1.66
NUP116YMR047C CPA1P07258 411 aaKnown RBP4.71□□□□□ -1.66
NUP116YMR047C STE4P18851 423 aa4.71□□□□□ -1.66
NUP116YMR047C YPK2P18961 677 aa4.71□□□□□ -1.66
NUP116YMR047C SIN4P32259 974 aa4.71□□□□□ -1.66
NUP116YMR047C CYM1P32898 989 aa4.71□□□□□ -1.66
NUP116YMR047C THO1P40040 218 aaKnown RBP4.71□□□□□ -1.66
NUP116YMR047C RIM8P53179 542 aa4.71□□□□□ -1.66
NUP116YMR047C ISU1Q03020 165 aa4.71□□□□□ -1.66
NUP116YMR047C STB3Q12427 513 aa4.71□□□□□ -1.66
NUP116YMR047C COX6P00427 148 aa4.71□□□□□ -1.66
NUP116YMR047C RPP1AP05318 106 aaPredicted RBP4.71□□□□□ -1.66
NUP116YMR047C PRB1P09232 635 aa4.71□□□□□ -1.66
NUP116YMR047C GAL3P13045 520 aa4.71□□□□□ -1.66
NUP116YMR047C DAL82P21705 255 aa4.71□□□□□ -1.66
NUP116YMR047C PPH21P23594 369 aa4.71□□□□□ -1.66
NUP116YMR047C GIT1P25346 518 aa4.71□□□□□ -1.66
NUP116YMR047C MF(ALPHA)2P32435 120 aa4.71□□□□□ -1.66
NUP116YMR047C CDC12P32468 407 aaKnown RBP4.71□□□□□ -1.66
NUP116YMR047C PET127P32606 800 aa4.71□□□□□ -1.66
NUP116YMR047C ELF1P36053 145 aa4.71□□□□□ -1.66
NUP116YMR047C AIM3P38266 947 aaKnown RBP4.71□□□□□ -1.66
NUP116YMR047C UBA4P38820 440 aa4.71□□□□□ -1.66
NUP116YMR047C MTG2P38860 518 aa4.71□□□□□ -1.66
NUP116YMR047C PZF1P39933 429 aa4.71□□□□□ -1.66
NUP116YMR047C NEO1P40527 1151 aa4.71□□□□□ -1.66
NUP116YMR047C NMD5P46970 1048 aa4.71□□□□□ -1.66
NUP116YMR047C DIE2P50076 525 aa4.71□□□□□ -1.66
NUP116YMR047C RPN14P53196 417 aa4.71□□□□□ -1.66
NUP116YMR047C HED1Q03937 162 aa4.71□□□□□ -1.66
NUP116YMR047C PNS1Q12412 539 aa4.71□□□□□ -1.66
NUP116YMR047C IPP1P00817 287 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C RPP2BP02400 110 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C RPL1AP0CX43 217 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C RPL1BP0CX44 217 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C CDC24P11433 854 aaPredicted RBP4.7□□□□□ -1.66
NUP116YMR047C CDC13P32797 924 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C PPG1P32838 368 aa4.7□□□□□ -1.66
NUP116YMR047C LRG1P35688 1017 aa4.7□□□□□ -1.66
NUP116YMR047C OAF3P36023 863 aa4.7□□□□□ -1.66
NUP116YMR047C YKL077WP36081 392 aa4.7□□□□□ -1.66
NUP116YMR047C MNL1P38888 796 aa4.7□□□□□ -1.66
NUP116YMR047C HAT2P39984 401 aa4.7□□□□□ -1.66
NUP116YMR047C ALR2P43553 858 aa4.7□□□□□ -1.66
NUP116YMR047C DUG1P43616 481 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C ASN2P49090 572 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C FMP48P53233 369 aa4.7□□□□□ -1.66
NUP116YMR047C DAM1P53267 343 aa4.7□□□□□ -1.66
NUP116YMR047C HRK1Q08732 759 aaKnown RBP4.7□□□□□ -1.66
NUP116YMR047C VIK1Q12045 647 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms