RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W MEP3P53390 489 aa2.93□□□□□ -1.94
CSI1YMR025W PDS5Q04264 1277 aa2.93□□□□□ -1.94
CSI1YMR025W IES4Q08561 116 aa2.93□□□□□ -1.94
CSI1YMR025W YDL007C-AQ2V2Q0 85 aa2.93□□□□□ -1.94
CSI1YMR025W YGL108CP53139 140 aa2.92□□□□□ -1.94
CSI1YMR025W YDR239CQ03780 787 aa2.92□□□□□ -1.94
CSI1YMR025W VHS1Q03785 461 aa2.92□□□□□ -1.94
CSI1YMR025W VMS1Q04311 632 aaKnown RBP2.92□□□□□ -1.94
CSI1YMR025W ATP10P18496 279 aa2.91□□□□□ -1.94
CSI1YMR025W MUD1P32605 298 aaKnown RBP2.91□□□□□ -1.94
CSI1YMR025W CSE2P33308 149 aa2.91□□□□□ -1.94
CSI1YMR025W THI2P38141 450 aa2.91□□□□□ -1.94
CSI1YMR025W YGR066CP53242 292 aa2.91□□□□□ -1.94
CSI1YMR025W NCS2P53923 493 aaPredicted RBP2.91□□□□□ -1.94
CSI1YMR025W BI3Q9ZZW7 517 aa2.91□□□□□ -1.94
CSI1YMR025W HSL1P34244 1518 aa2.91□□□□□ -1.94
CSI1YMR025W SEC53P07283 254 aaKnown RBP2.9□□□□□ -1.95
CSI1YMR025W PRB1P09232 635 aa2.9□□□□□ -1.95
CSI1YMR025W MUD2P36084 527 aaKnown RBP2.9□□□□□ -1.95
CSI1YMR025W SEO1P39709 593 aa2.9□□□□□ -1.95
CSI1YMR025W YMR018WQ04364 514 aa2.9□□□□□ -1.95
CSI1YMR025W YPQ1Q12010 308 aa2.9□□□□□ -1.95
CSI1YMR025W BUD4P47136 1447 aa2.9□□□□□ -1.95
CSI1YMR025W BMT2P38278 337 aa2.89□□□□□ -1.95
CSI1YMR025W KTR5P53966 522 aaPredicted RBP2.89□□□□□ -1.95
CSI1YMR025W AHC1Q12433 566 aa2.89□□□□□ -1.95
CSI1YMR025W TOP1P04786 769 aa2.88□□□□□ -1.95
CSI1YMR025W ECM25P32525 599 aa2.88□□□□□ -1.95
CSI1YMR025W MRE11P32829 692 aa2.88□□□□□ -1.95
CSI1YMR025W VPS24P36095 224 aaKnown RBP2.88□□□□□ -1.95
CSI1YMR025W MIG3P39943 394 aa2.88□□□□□ -1.95
CSI1YMR025W PET130P47065 347 aa2.88□□□□□ -1.95
CSI1YMR025W ECM11Q04110 302 aa2.88□□□□□ -1.95
CSI1YMR025W OPY2Q06810 360 aa2.88□□□□□ -1.95
CSI1YMR025W PLP2Q12017 286 aa2.88□□□□□ -1.95
CSI1YMR025W RCN2Q12044 265 aa2.88□□□□□ -1.95
CSI1YMR025W SNT1P25357 1226 aa2.87□□□□□ -1.95
CSI1YMR025W CHK1P38147 527 aa2.87□□□□□ -1.95
CSI1YMR025W DFG10P40526 253 aa2.87□□□□□ -1.95
CSI1YMR025W MRX6P48564 524 aa2.87□□□□□ -1.95
CSI1YMR025W YNR048WP53740 393 aa2.87□□□□□ -1.95
CSI1YMR025W FRE4P53746 719 aa2.87□□□□□ -1.95
CSI1YMR025W DSL1P53847 754 aa2.87□□□□□ -1.95
CSI1YMR025W YDR387CQ04162 555 aa2.87□□□□□ -1.95
CSI1YMR025W CBS1P14066 229 aa2.86□□□□□ -1.95
CSI1YMR025W GYP6P32806 458 aa2.86□□□□□ -1.95
CSI1YMR025W FUI1P38196 639 aa2.86□□□□□ -1.95
CSI1YMR025W CTI6Q08923 506 aa2.86□□□□□ -1.95
CSI1YMR025W YRM1Q12340 786 aa2.86□□□□□ -1.95
CSI1YMR025W IZH2Q12442 317 aa2.86□□□□□ -1.95
CSI1YMR025W HIR3P47171 1648 aa2.86□□□□□ -1.95
CSI1YMR025W TEF1P02994 458 aaKnown RBP2.85□□□□□ -1.95
CSI1YMR025W PWP2P25635 923 aaKnown RBP2.85□□□□□ -1.95
CSI1YMR025W MRPS9P38120 278 aa2.85□□□□□ -1.95
CSI1YMR025W CCT2P39076 527 aaKnown RBP2.85□□□□□ -1.95
CSI1YMR025W CHS6P40955 746 aa2.85□□□□□ -1.95
CSI1YMR025W ECM27P47144 725 aa2.85□□□□□ -1.95
CSI1YMR025W TAP42Q04372 366 aa2.85□□□□□ -1.95
CSI1YMR025W YPS3Q12303 508 aa2.85□□□□□ -1.95
CSI1YMR025W THO2P53552 1597 aaKnown RBP2.85□□□□□ -1.95
CSI1YMR025W PSK1P31374 1356 aa2.85□□□□□ -1.95
CSI1YMR025W RHO2P06781 192 aa2.84□□□□□ -1.95
CSI1YMR025W DFR1P07807 211 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
CSI1YMR025W REC114P32841 428 aa2.84□□□□□ -1.95
CSI1YMR025W TFG2P41896 400 aaPredicted RBP2.84□□□□□ -1.95
CSI1YMR025W YPR091CQ06833 770 aa2.84□□□□□ -1.95
CSI1YMR025W SEC39Q12745 709 aa2.84□□□□□ -1.95
CSI1YMR025W XRN1P22147 1528 aaKnown RBP2.83□□□□□ -1.96
CSI1YMR025W AFG1P32317 509 aa2.83□□□□□ -1.96
CSI1YMR025W APE2P32454 952 aaKnown RBP2.83□□□□□ -1.96
CSI1YMR025W SPT10P35208 640 aa2.83□□□□□ -1.96
CSI1YMR025W TIM17P39515 158 aa2.83□□□□□ -1.96
CSI1YMR025W DOT5P40553 215 aa2.83□□□□□ -1.96
CSI1YMR025W HSP31Q04432 237 aa2.83□□□□□ -1.96
CSI1YMR025W REV3P14284 1504 aa2.83□□□□□ -1.96
CSI1YMR025W ARG4P04076 463 aaPredicted RBP2.82□□□□□ -1.96
CSI1YMR025W ARA1P38115 344 aa2.82□□□□□ -1.96
CSI1YMR025W YER186CP40101 306 aa2.82□□□□□ -1.96
CSI1YMR025W RMD9P53140 646 aaKnown RBP2.82□□□□□ -1.96
CSI1YMR025W RTS3P53289 263 aa2.82□□□□□ -1.96
CSI1YMR025W ADA2Q02336 434 aa2.82□□□□□ -1.96
CSI1YMR025W MDS3P53094 1487 aa2.82□□□□□ -1.96
CSI1YMR025W HIS4P00815 799 aaKnown RBP2.81□□□□□ -1.96
CSI1YMR025W RPI1P23250 407 aaKnown RBP2.81□□□□□ -1.96
CSI1YMR025W SPB1P25582 841 aaPredicted RBP2.81□□□□□ -1.96
CSI1YMR025W MCM10P32354 571 aa2.81□□□□□ -1.96
CSI1YMR025W PRP21P32524 280 aaPredicted RBP2.81□□□□□ -1.96
CSI1YMR025W RML2P32611 393 aa2.81□□□□□ -1.96
CSI1YMR025W LYS1P38998 373 aaRIP-Chip data2.81□□□□□ -1.96not detected
CSI1YMR025W MDE1P47095 244 aa2.81□□□□□ -1.96
CSI1YMR025W YGR149WP48236 432 aa2.81□□□□□ -1.96
CSI1YMR025W ARE2P53629 642 aaKnown RBP2.81□□□□□ -1.96
CSI1YMR025W PRM7Q12459 698 aa2.81□□□□□ -1.96
CSI1YMR025W RTP1Q12751 981 aa2.81□□□□□ -1.96
CSI1YMR025W YLR278CQ05854 1341 aa2.81□□□□□ -1.96
CSI1YMR025W FOB1O13329 566 aa2.8□□□□□ -1.96
CSI1YMR025W NAM2P11325 894 aa2.8□□□□□ -1.96
CSI1YMR025W IDH2P28241 369 aaKnown RBP2.8□□□□□ -1.96
CSI1YMR025W RAD14P28519 371 aa2.8□□□□□ -1.96
CSI1YMR025W HIR2P32480 875 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms