RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	ADE5,7	P07244	802 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	ILV2	P07342	687 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	COQ1	P18900	473 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	AMS1	P22855	1083 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	RAD14	P28519	371 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	SIP1	P32578	815 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	SAC6	P32599	642 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	DUT1	P33317	147 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	YBR259W	P38338	688 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	FET3	P38993	636 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	SAH1	P39954	449 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	RMD6	P39975	231 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	JHD1	P40034	492 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	GIP2	P40036	548 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	YER121W	P40076	114 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	CSM2	P40465	213 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	SER33	P40510	469 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	PNC1	P53184	216 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	YGL036W	P53185	909 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	IMO32	P53219	342 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	BUD17	P53727	317 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	DID2	P69771	204 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	TMA20	P89886	181 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	YPL080C	Q02826	108 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	ENT5	Q03769	411 aa	Known RBP	4.88	□□□□□ -1.63
SEC39	YLR440C	CSN9	Q03981	162 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	ADY4	Q05955	493 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	NEJ1	Q06148	342 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	NSL1	Q12143	216 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	ATG34	Q12292	412 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	OCA6	Q12454	224 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	KCS1	Q12494	1050 aa		4.88	□□□□□ -1.63
SEC39	YLR440C	RPL6B	P05739	176 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	SNA3	P14359	133 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	CLB2	P24869	491 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	PBN1	P25580	416 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	RPS1A	P33442	255 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	YBL055C	P34220	418 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	PRX1	P34227	261 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	CLG1	P35190	452 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YBR284W	P38150	797 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	PPE1	P38796	400 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YEL025C	P39991	1188 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YGR201C	P42936	225 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	IRC5	P43610	853 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	RPE1	P46969	238 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	NMD5	P46970	1048 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	ALY2	P47029	1046 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	SOV1	Q04748	898 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	RQC1	Q05468	723 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	LDB18	Q07887	179 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	NSE1	Q07913	336 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YLR040C	Q07988	224 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	FRE3	Q08905	711 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	GRE1	Q08969	168 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	APC9	Q12107	265 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	UBX3	Q12229	455 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	EMP46	Q12396	444 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	PTC5	Q12511	572 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	TRP4	P07285	380 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	SWI5	P08153	709 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	MRP2	P10663	115 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	ABF1	P14164	731 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	GUK1	P15454	187 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	HXT2	P23585	541 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	HCM1	P25364	564 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	RSA4	P25382	515 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	DCC1	P25559	380 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	MCM4	P30665	933 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	PHA2	P32452	334 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	HXT4	P32467	576 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	PET127	P32606	800 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	TGL1	P34163	548 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YCR087C-A	P37263	153 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	ECM8	P38246	354 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YHR202W	P38887	602 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	DUN1	P39009	513 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	AFG3	P39925	761 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	AST2	P39945	430 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	VRG4	P40107	337 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YAR1	P46683	200 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	PFD1	P46988	109 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YJR115W	P47152	169 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	COG1	P53079	417 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	DBP6	P53734	629 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	TEP1	P53916	434 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	MOT3	P54785	490 aa	Known RBP	4.87	□□□□□ -1.63
SEC39	YLR440C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SEC39	YLR440C	TIM44	Q01852	431 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YMR279C	Q03263	540 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	YDR249C	Q03787	373 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	THI22	Q06490	572 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	OPT2	Q06593	877 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	RTT109	Q07794	436 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	GAS5	Q08193	484 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	RDR1	Q08904	546 aa		4.87	□□□□□ -1.63
SEC39	YLR440C	ZWF1	P11412	505 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	FRS2	P15625	503 aa	Known RBP	4.86	□□□□□ -1.63
SEC39	YLR440C	ZRC1	P20107	442 aa		4.86	□□□□□ -1.63
SEC39	YLR440C	CPR2	P23285	205 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms