RNA–Protein interactions for RNA: YLR420W

URA4, Transcript of Dihydroorotase, yeast

Gene URA4, Length 1,095 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA4	YLR420W	SMC5	Q08204	1093 aa		4.08	□□□□□ -1.76
URA4	YLR420W	CAR1	P00812	333 aa	Known RBP	4.07	□□□□□ -1.76
URA4	YLR420W	SGF29	P25554	259 aa		4.07	□□□□□ -1.76
URA4	YLR420W	NDC1	P32500	655 aa		4.07	□□□□□ -1.76
URA4	YLR420W	UIP5	P36137	443 aa		4.07	□□□□□ -1.76
URA4	YLR420W	ROK1	P45818	564 aa	Predicted RBP	4.07	□□□□□ -1.76
URA4	YLR420W	NBP1	P52919	319 aa	Predicted RBP	4.07	□□□□□ -1.76
URA4	YLR420W	RSC1	P53236	928 aa		4.07	□□□□□ -1.76
URA4	YLR420W	CAF130	P53280	1122 aa	Predicted RBP	4.07	□□□□□ -1.76
URA4	YLR420W	TOF1	P53840	1238 aa		4.07	□□□□□ -1.76
URA4	YLR420W	RHO4	Q00246	291 aa		4.07	□□□□□ -1.76
URA4	YLR420W	THI20	Q08224	551 aa		4.07	□□□□□ -1.76
URA4	YLR420W	YOL075C	Q08234	1294 aa		4.07	□□□□□ -1.76
URA4	YLR420W	NOP58	Q12499	511 aa	Known RBP	4.07	□□□□□ -1.76
URA4	YLR420W	SET6	Q12529	373 aa		4.07	□□□□□ -1.76
URA4	YLR420W	RTP1	Q12751	981 aa		4.07	□□□□□ -1.76
URA4	YLR420W	SNA3	P14359	133 aa		4.06	□□□□□ -1.76
URA4	YLR420W	EST1	P17214	699 aa	Predicted RBP	4.06	□□□□□ -1.76
URA4	YLR420W	BUD14	P27637	709 aa		4.06	□□□□□ -1.76
URA4	YLR420W	PSO2	P30620	661 aa		4.06	□□□□□ -1.76
URA4	YLR420W	SYN8	P31377	255 aa		4.06	□□□□□ -1.76
URA4	YLR420W	YSC83	P32792	385 aa		4.06	□□□□□ -1.76
URA4	YLR420W	COT1	P32798	439 aa		4.06	□□□□□ -1.76
URA4	YLR420W	MUD2	P36084	527 aa	Known RBP	4.06	□□□□□ -1.76
URA4	YLR420W	CIN4	P39110	191 aa		4.06	□□□□□ -1.76
URA4	YLR420W	AIP1	P46680	615 aa	Known RBP	4.06	□□□□□ -1.76
URA4	YLR420W	VID30	P53076	958 aa		4.06	□□□□□ -1.76
URA4	YLR420W	EBS1	Q03466	884 aa	Known RBP	4.06	□□□□□ -1.76
URA4	YLR420W	CUR1	Q06469	252 aa		4.06	□□□□□ -1.76
URA4	YLR420W	TAO3	P40468	2376 aa		4.06	□□□□□ -1.76
URA4	YLR420W	SEC53	P07283	254 aa	Known RBP	4.05	□□□□□ -1.76
URA4	YLR420W	MRS3	P10566	314 aa		4.05	□□□□□ -1.76
URA4	YLR420W	APE1	P14904	514 aa		4.05	□□□□□ -1.76
URA4	YLR420W	PRP16	P15938	1071 aa	Predicted RBP	4.05	□□□□□ -1.76
URA4	YLR420W	OM45	P16547	393 aa		4.05	□□□□□ -1.76
URA4	YLR420W	CLC1	P17891	233 aa		4.05	□□□□□ -1.76
URA4	YLR420W	RPC53	P25441	422 aa		4.05	□□□□□ -1.76
URA4	YLR420W	RPS2	P25443	254 aa	Known RBP	4.05	□□□□□ -1.76
URA4	YLR420W	MRPL10	P36520	322 aa		4.05	□□□□□ -1.76
URA4	YLR420W	RTT101	P47050	842 aa		4.05	□□□□□ -1.76
URA4	YLR420W	AZR1	P50080	613 aa		4.05	□□□□□ -1.76
URA4	YLR420W	ALT2	P52892	507 aa		4.05	□□□□□ -1.76
URA4	YLR420W	DUO1	P53168	247 aa	Known RBP	4.05	□□□□□ -1.76
URA4	YLR420W	RTT102	P53330	157 aa		4.05	□□□□□ -1.76
URA4	YLR420W	IPI3	P53877	555 aa		4.05	□□□□□ -1.76
URA4	YLR420W	YNL146W	P53906	100 aa		4.05	□□□□□ -1.76
URA4	YLR420W	HCR1	Q05775	265 aa	Known RBP	4.05	□□□□□ -1.76
URA4	YLR420W	IES4	Q08561	116 aa		4.05	□□□□□ -1.76
URA4	YLR420W	YBR298C-A	Q8TGK4	73 aa		4.05	□□□□□ -1.76
URA4	YLR420W	CDC37	P06101	506 aa	Known RBP	4.04	□□□□□ -1.76
URA4	YLR420W	DPH2	P32461	534 aa		4.04	□□□□□ -1.76
URA4	YLR420W	SIP2	P34164	415 aa	Known RBP	4.04	□□□□□ -1.76
URA4	YLR420W	SEF1	P34228	1148 aa		4.04	□□□□□ -1.76
URA4	YLR420W	YET1	P35723	206 aa		4.04	□□□□□ -1.76
URA4	YLR420W	YBP1	P38315	674 aa		4.04	□□□□□ -1.76
URA4	YLR420W	TVP23	P38962	199 aa		4.04	□□□□□ -1.76
URA4	YLR420W	ALD5	P40047	520 aa	Known RBP	4.04	□□□□□ -1.76
URA4	YLR420W	ALG5	P40350	334 aa		4.04	□□□□□ -1.76
URA4	YLR420W	LCB2	P40970	561 aa		4.04	□□□□□ -1.76
URA4	YLR420W	TOS3	P43637	560 aa		4.04	□□□□□ -1.76
URA4	YLR420W	IMP4	P53941	290 aa	Known RBP	4.04	□□□□□ -1.76
URA4	YLR420W	VPS72	Q03388	795 aa		4.04	□□□□□ -1.76
URA4	YLR420W	COG4	Q06096	861 aa		4.04	□□□□□ -1.76
URA4	YLR420W	MED1	Q12321	566 aa		4.04	□□□□□ -1.76
URA4	YLR420W	HIF1	Q12373	385 aa		4.04	□□□□□ -1.76
URA4	YLR420W	YDR524C-B	Q3E6R4	66 aa		4.04	□□□□□ -1.76
URA4	YLR420W	MOT1	P32333	1867 aa		4.03	□□□□□ -1.76
URA4	YLR420W	GDH1	P07262	454 aa	Known RBP	4.03	□□□□□ -1.76
URA4	YLR420W	ART10	P18634	518 aa	Known RBP	4.03	□□□□□ -1.76
URA4	YLR420W	CPR3	P25719	182 aa		4.03	□□□□□ -1.76
URA4	YLR420W	MPE1	P35728	441 aa	Known RBP	4.03	□□□□□ -1.76
URA4	YLR420W	RPH1	P39956	796 aa		4.03	□□□□□ -1.76
URA4	YLR420W	YJL213W	P40896	331 aa		4.03	□□□□□ -1.76
URA4	YLR420W	TFG2	P41896	400 aa	Predicted RBP	4.03	□□□□□ -1.76
URA4	YLR420W	MNP1	P53163	194 aa	Predicted RBP	4.03	□□□□□ -1.76
URA4	YLR420W	RBG2	P53295	368 aa	Known RBP	4.03	□□□□□ -1.76
URA4	YLR420W	BUD32	P53323	261 aa		4.03	□□□□□ -1.76
URA4	YLR420W	YMR087W	Q04299	284 aa		4.03	□□□□□ -1.76
URA4	YLR420W	ECM7	Q06200	448 aa		4.03	□□□□□ -1.76
URA4	YLR420W	SPE4	Q12455	300 aa		4.03	□□□□□ -1.76
URA4	YLR420W	COX4	P04037	155 aa		4.02	□□□□□ -1.77
URA4	YLR420W	RPL15A	P05748	204 aa	Known RBP	4.02	□□□□□ -1.77
URA4	YLR420W	KAR3	P17119	729 aa		4.02	□□□□□ -1.77
URA4	YLR420W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
URA4	YLR420W	MUD1	P32605	298 aa	Known RBP	4.02	□□□□□ -1.77
URA4	YLR420W	MRX3	P38172	270 aa		4.02	□□□□□ -1.77
URA4	YLR420W	VID24	P38263	362 aa		4.02	□□□□□ -1.77
URA4	YLR420W	CTM1	P38818	585 aa		4.02	□□□□□ -1.77
URA4	YLR420W	KRE9	P39005	276 aa		4.02	□□□□□ -1.77
URA4	YLR420W	VPS52	P39904	641 aa		4.02	□□□□□ -1.77
URA4	YLR420W	HSH155	P49955	971 aa	Known RBP	4.02	□□□□□ -1.77
URA4	YLR420W	SHE10	P53075	577 aa		4.02	□□□□□ -1.77
URA4	YLR420W	MSC1	Q03104	513 aa		4.02	□□□□□ -1.77
URA4	YLR420W	DON1	Q05610	365 aa		4.02	□□□□□ -1.77
URA4	YLR420W	PHO13	P19881	312 aa		4.01	□□□□□ -1.77
URA4	YLR420W	GFD2	P25370	566 aa	Known RBP	4.01	□□□□□ -1.77
URA4	YLR420W	RPC25	P35718	212 aa		4.01	□□□□□ -1.77
URA4	YLR420W	SPT8	P38915	602 aa		4.01	□□□□□ -1.77
URA4	YLR420W	FLC2	P39719	783 aa		4.01	□□□□□ -1.77
URA4	YLR420W	TMA108	P40462	946 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms