RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W SRF1Q12516 437 aa5.1□□□□□ -1.59
PWP1YLR196W MF(ALPHA)1P01149 165 aa5.09□□□□□ -1.59
PWP1YLR196W NHP6AP11632 93 aaKnown RBP5.09□□□□□ -1.59
PWP1YLR196W MRP13P12686 339 aa5.09□□□□□ -1.59
PWP1YLR196W HAP4P14064 554 aa5.09□□□□□ -1.59
PWP1YLR196W SGV1P23293 657 aaKnown RBP5.09□□□□□ -1.59
PWP1YLR196W PRE7P23724 241 aaKnown RBP5.09□□□□□ -1.59
PWP1YLR196W IRE1P32361 1115 aa5.09□□□□□ -1.59
PWP1YLR196W NDC1P32500 655 aa5.09□□□□□ -1.59
PWP1YLR196W PET309P32522 965 aaPredicted RBP5.09□□□□□ -1.59
PWP1YLR196W SCM4P32564 187 aa5.09□□□□□ -1.59
PWP1YLR196W SPO23P33757 523 aa5.09□□□□□ -1.59
PWP1YLR196W YOX1P34161 385 aa5.09□□□□□ -1.59
PWP1YLR196W OAR1P35731 278 aa5.09□□□□□ -1.59
PWP1YLR196W BET3P36149 193 aa5.09□□□□□ -1.59
PWP1YLR196W ARA1P38115 344 aa5.09□□□□□ -1.59
PWP1YLR196W YBP1P38315 674 aa5.09□□□□□ -1.59
PWP1YLR196W URA8P38627 578 aaPredicted RBP5.09□□□□□ -1.59
PWP1YLR196W CYC2P38909 366 aa5.09□□□□□ -1.59
PWP1YLR196W UBP5P39944 805 aa5.09□□□□□ -1.59
PWP1YLR196W CFD1P40558 293 aa5.09□□□□□ -1.59
PWP1YLR196W IRC6P43615 237 aa5.09□□□□□ -1.59
PWP1YLR196W RTT101P47050 842 aa5.09□□□□□ -1.59
PWP1YLR196W SWC4P53201 476 aa5.09□□□□□ -1.59
PWP1YLR196W YNR062CP53748 327 aa5.09□□□□□ -1.59
PWP1YLR196W OCA2P53949 197 aa5.09□□□□□ -1.59
PWP1YLR196W YPL080CQ02826 108 aa5.09□□□□□ -1.59
PWP1YLR196W SEG1Q04279 960 aa5.09□□□□□ -1.59
PWP1YLR196W LDB18Q07887 179 aa5.09□□□□□ -1.59
PWP1YLR196W ZEO1Q08245 113 aa5.09□□□□□ -1.59
PWP1YLR196W YOP1Q12402 180 aa5.09□□□□□ -1.59
PWP1YLR196W ISA2Q12425 185 aa5.09□□□□□ -1.59
PWP1YLR196W PHR1P05066 565 aaKnown RBP RIP-Chip data5.09□□□□□ -1.6not detected
PWP1YLR196W DST1P07273 309 aa5.09□□□□□ -1.6
PWP1YLR196W RPL35AP0CX84 120 aaKnown RBP5.09□□□□□ -1.6
PWP1YLR196W RPL35BP0CX85 120 aaKnown RBP5.09□□□□□ -1.6
PWP1YLR196W PEP5P12868 1029 aa5.09□□□□□ -1.6
PWP1YLR196W AIM17P23180 465 aaKnown RBP5.09□□□□□ -1.6
PWP1YLR196W YSP3P25036 478 aa5.09□□□□□ -1.6
PWP1YLR196W PER1P25625 357 aa5.09□□□□□ -1.6
PWP1YLR196W YCR051WP25631 222 aa5.09□□□□□ -1.6
PWP1YLR196W CMK1P27466 446 aaKnown RBP5.09□□□□□ -1.6
PWP1YLR196W LHP1P33399 275 aaKnown RBP5.09□□□□□ -1.6
PWP1YLR196W MRPL3P36516 390 aa5.09□□□□□ -1.6
PWP1YLR196W ETR1P38071 380 aa5.09□□□□□ -1.6
PWP1YLR196W TRM5P38793 499 aa5.09□□□□□ -1.6
PWP1YLR196W BZZ1P38822 633 aa5.09□□□□□ -1.6
PWP1YLR196W AGP3P43548 558 aa5.09□□□□□ -1.6
PWP1YLR196W SIP4P46954 829 aa5.09□□□□□ -1.6
PWP1YLR196W PHO86P46956 311 aa5.09□□□□□ -1.6
PWP1YLR196W AIM14P53109 570 aa5.09□□□□□ -1.6
PWP1YLR196W CPR6P53691 371 aaKnown RBP5.09□□□□□ -1.6
PWP1YLR196W NSG2P53898 299 aa5.09□□□□□ -1.6
PWP1YLR196W YNL115CP53925 644 aa5.09□□□□□ -1.6
PWP1YLR196W DIA1P54005 336 aa5.09□□□□□ -1.6
PWP1YLR196W TIM10P87108 93 aa5.09□□□□□ -1.6
PWP1YLR196W SKY1Q03656 742 aa5.09□□□□□ -1.6
PWP1YLR196W NSL1Q12143 216 aa5.09□□□□□ -1.6
PWP1YLR196W RUP1Q12242 671 aa5.09□□□□□ -1.6
PWP1YLR196W PSY3Q12318 242 aa5.09□□□□□ -1.6
PWP1YLR196W GRX6Q12438 231 aa5.09□□□□□ -1.6
PWP1YLR196W ARG82P07250 355 aa5.08□□□□□ -1.6
PWP1YLR196W YEL076C-AP0CX16 216 aa5.08□□□□□ -1.6
PWP1YLR196W YLR464WP0CX17 216 aa5.08□□□□□ -1.6
PWP1YLR196W SIR1P21691 654 aa5.08□□□□□ -1.6
PWP1YLR196W RER1P25560 188 aa5.08□□□□□ -1.6
PWP1YLR196W RPS5P26783 225 aaKnown RBP5.08□□□□□ -1.6
PWP1YLR196W GPI10P30777 616 aa5.08□□□□□ -1.6
PWP1YLR196W PGM1P33401 570 aaKnown RBP5.08□□□□□ -1.6
PWP1YLR196W NTR2P36118 322 aaPredicted RBP5.08□□□□□ -1.6
PWP1YLR196W YKR078WP36158 585 aaKnown RBP5.08□□□□□ -1.6
PWP1YLR196W AIM3P38266 947 aaKnown RBP5.08□□□□□ -1.6
PWP1YLR196W PCM1P38628 557 aaKnown RBP5.08□□□□□ -1.6
PWP1YLR196W GPB2P39717 880 aa5.08□□□□□ -1.6
PWP1YLR196W YEL076CP39971 216 aa5.08□□□□□ -1.6
PWP1YLR196W SMX2P40204 77 aaKnown RBP5.08□□□□□ -1.6
PWP1YLR196W IRC7P43623 340 aa5.08□□□□□ -1.6
PWP1YLR196W PUS4P48567 403 aaKnown RBP5.08□□□□□ -1.6
PWP1YLR196W IMA1P53051 589 aa5.08□□□□□ -1.6
PWP1YLR196W SLD3P53135 668 aa5.08□□□□□ -1.6
PWP1YLR196W RIM8P53179 542 aa5.08□□□□□ -1.6
PWP1YLR196W YGR026WP53217 278 aa5.08□□□□□ -1.6
PWP1YLR196W YSA1Q01976 231 aa5.08□□□□□ -1.6
PWP1YLR196W SMP3Q04174 516 aa5.08□□□□□ -1.6
PWP1YLR196W OPT2Q06593 877 aa5.08□□□□□ -1.6
PWP1YLR196W YPR078CQ06813 372 aa5.08□□□□□ -1.6
PWP1YLR196W YDL086WQ07505 273 aa5.08□□□□□ -1.6
PWP1YLR196W FLC1Q08967 793 aa5.08□□□□□ -1.6
PWP1YLR196W FEX2Q08991 375 aa5.08□□□□□ -1.6
PWP1YLR196W YRR1Q12172 810 aa5.08□□□□□ -1.6
PWP1YLR196W INP53Q12271 1107 aa5.08□□□□□ -1.6
PWP1YLR196W YOR012WQ12351 137 aa5.08□□□□□ -1.6
PWP1YLR196W FRS1P15624 595 aaKnown RBP5.07□□□□□ -1.6
PWP1YLR196W ILV6P25605 309 aaKnown RBP5.07□□□□□ -1.6
PWP1YLR196W SFP1P32432 683 aa5.07□□□□□ -1.6
PWP1YLR196W BEM3P32873 1128 aa5.07□□□□□ -1.6
PWP1YLR196W PDR3P33200 976 aa5.07□□□□□ -1.6
PWP1YLR196W ICS2P38284 255 aa5.07□□□□□ -1.6
PWP1YLR196W AME1P38313 324 aa5.07□□□□□ -1.6
PWP1YLR196W CHS6P40955 746 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms